Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LTK15_RS04595 Genome accession   NZ_CP089154
Coordinates   883987..884610 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain UNC_SaCF36     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 878987..889610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LTK15_RS04565 (LTK15_04565) - 879961..880428 (-) 468 WP_000966144.1 CcdC family protein -
  LTK15_RS04570 (LTK15_04570) - 880522..880620 (-) 99 WP_001789897.1 hypothetical protein -
  LTK15_RS04575 (LTK15_04575) - 880607..880849 (-) 243 WP_000246909.1 YneF family protein -
  LTK15_RS04580 (LTK15_04580) recP/tkt 881127..883115 (-) 1989 WP_000481440.1 transketolase Machinery gene
  LTK15_RS04585 (LTK15_04585) - 883236..883475 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  LTK15_RS04590 (LTK15_04590) sosA 883611..883844 (-) 234 WP_000499648.1 DNA damage-induced cell division inhibitor SosA -
  LTK15_RS04595 (LTK15_04595) dinR/lexA 883987..884610 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  LTK15_RS04600 (LTK15_04600) - 884990..886006 (-) 1017 WP_169428106.1 CAP domain-containing protein -
  LTK15_RS04610 (LTK15_04610) guaC 886028..887005 (-) 978 WP_000688134.1 GMP reductase -
  LTK15_RS04615 (LTK15_04615) rpsN 887162..887431 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  LTK15_RS04620 (LTK15_04620) rpmG 887884..888033 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=549079 LTK15_RS04595 WP_001208755.1 883987..884610(+) (dinR/lexA) [Staphylococcus aureus strain UNC_SaCF36]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=549079 LTK15_RS04595 WP_001208755.1 883987..884610(+) (dinR/lexA) [Staphylococcus aureus strain UNC_SaCF36]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGAGAAATTGGAGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGCGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657