Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LTK15_RS01810 Genome accession   NZ_CP089154
Coordinates   313340..314158 (+) Length   272 a.a.
NCBI ID   WP_196579356.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UNC_SaCF36     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 308340..319158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LTK15_RS01785 (LTK15_01785) - 308602..310047 (+) 1446 WP_001148112.1 SH3 domain-containing protein -
  LTK15_RS01790 (LTK15_01790) - 310691..310771 (-) 81 WP_100250272.1 hypothetical protein -
  LTK15_RS01795 (LTK15_01795) - 311118..311279 (+) 162 WP_001005407.1 SE1561 family protein -
  LTK15_RS01800 (LTK15_01800) - 311413..311928 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  LTK15_RS01805 (LTK15_01805) sgtB 312270..313079 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  LTK15_RS01810 (LTK15_01810) recX 313340..314158 (+) 819 WP_196579356.1 recombination regulator RecX Regulator
  LTK15_RS01815 (LTK15_01815) - 314136..314450 (+) 315 WP_000435806.1 YfhH family protein -
  LTK15_RS01820 (LTK15_01820) - 314465..315982 (+) 1518 WP_000535840.1 ABC transporter ATP-binding protein -
  LTK15_RS01825 (LTK15_01825) - 315991..316827 (+) 837 WP_000886472.1 hypothetical protein -
  LTK15_RS01830 (LTK15_01830) - 317088..318065 (-) 978 WP_000379095.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32273.12 Da        Isoelectric Point: 5.9211

>NTDB_id=549048 LTK15_RS01810 WP_196579356.1 313340..314158(+) (recX) [Staphylococcus aureus strain UNC_SaCF36]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLIKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
LQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=549048 LTK15_RS01810 WP_196579356.1 313340..314158(+) (recX) [Staphylococcus aureus strain UNC_SaCF36]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAATCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
TTACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCAGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989