Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GLO7428_RS01735 | Genome accession | NC_019745 |
| Coordinates | 389231..390367 (+) | Length | 378 a.a. |
| NCBI ID | WP_015186830.1 | Uniprot ID | K9X8X3 |
| Organism | Gloeocapsa sp. PCC 7428 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 384231..395367
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GLO7428_RS01725 (Glo7428_0347) | grpE | 386235..386924 (-) | 690 | WP_015186828.1 | nucleotide exchange factor GrpE | - |
| GLO7428_RS01730 (Glo7428_0348) | pilB/pilB1 | 387187..389187 (+) | 2001 | WP_015186829.1 | GspE/PulE family protein | Machinery gene |
| GLO7428_RS01735 (Glo7428_0349) | pilT | 389231..390367 (+) | 1137 | WP_015186830.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GLO7428_RS01740 (Glo7428_0350) | - | 390637..391860 (+) | 1224 | WP_015186831.1 | type II secretion system F family protein | - |
| GLO7428_RS01745 (Glo7428_0351) | - | 391910..392467 (+) | 558 | WP_015186832.1 | hypothetical protein | - |
| GLO7428_RS26400 | - | 392621..392833 (-) | 213 | WP_071882336.1 | AAA-like domain-containing protein | - |
| GLO7428_RS01750 (Glo7428_0352) | - | 392850..393587 (-) | 738 | WP_041918481.1 | toll/interleukin-1 receptor domain-containing protein | - |
| GLO7428_RS25800 | - | 394677..395201 (+) | 525 | WP_155823553.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 41487.69 Da Isoelectric Point: 6.5016
>NTDB_id=54903 GLO7428_RS01735 WP_015186830.1 389231..390367(+) (pilT) [Gloeocapsa sp. PCC 7428]
MDYMIEDLMEQVIACGGSDLHISTGLPPYIRISGKLTPTEYEPLTAEQCQRLIFTMLNNTQRKHLEQNWELDCSYGVRGL
ARFRVNVYKDRGTYAACLRALSSQIPSMDALKLPDIVREVSEKPRGLVLVTGPTGSGKSTTLASMINNINMTRSEHILTI
EDPIEFVYEPIQSLIHQRQIGEDTKSFANALRAALREDPDVILVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RMVDVFSPEQQQQIRVQLSNSLVAVFSQTLVPRKNPKPGEFGRVMAQEIMIVTPAIANLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADLYKAGTISLEAAMSKTSKPDELQRLIGGNIPSAQTMAARSASGKPVLVN
MDYMIEDLMEQVIACGGSDLHISTGLPPYIRISGKLTPTEYEPLTAEQCQRLIFTMLNNTQRKHLEQNWELDCSYGVRGL
ARFRVNVYKDRGTYAACLRALSSQIPSMDALKLPDIVREVSEKPRGLVLVTGPTGSGKSTTLASMINNINMTRSEHILTI
EDPIEFVYEPIQSLIHQRQIGEDTKSFANALRAALREDPDVILVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RMVDVFSPEQQQQIRVQLSNSLVAVFSQTLVPRKNPKPGEFGRVMAQEIMIVTPAIANLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADLYKAGTISLEAAMSKTSKPDELQRLIGGNIPSAQTMAARSASGKPVLVN
Nucleotide
Download Length: 1137 bp
>NTDB_id=54903 GLO7428_RS01735 WP_015186830.1 389231..390367(+) (pilT) [Gloeocapsa sp. PCC 7428]
ATGGATTACATGATTGAAGACCTTATGGAGCAAGTTATTGCTTGCGGAGGCTCCGATTTACACATTTCTACTGGTTTACC
TCCTTATATCCGTATCAGTGGCAAGTTGACTCCTACAGAGTACGAACCGTTAACGGCGGAACAATGCCAGCGGTTGATTT
TTACGATGTTAAATAATACACAGCGCAAGCACCTTGAGCAAAACTGGGAACTTGATTGCTCTTATGGAGTGCGAGGCTTA
GCACGTTTTCGTGTCAATGTTTACAAAGATCGCGGCACTTACGCAGCGTGTTTGCGGGCGCTTTCTTCCCAAATTCCCAG
TATGGATGCGTTGAAGCTACCAGATATTGTGCGGGAAGTTTCGGAAAAGCCAAGGGGATTAGTTTTAGTTACAGGTCCAA
CAGGTTCTGGGAAGTCAACAACGTTGGCGTCAATGATTAACAACATTAATATGACGCGATCGGAACACATCTTAACGATT
GAAGACCCGATTGAATTCGTTTACGAACCGATTCAAAGCTTAATTCATCAACGTCAAATCGGGGAAGATACCAAAAGTTT
TGCTAATGCTTTGAGAGCAGCGTTACGCGAAGATCCTGATGTGATTCTTGTCGGTGAAATGCGTGACTTAGAAACAATTT
CGCTAGCAATTTCTGCGGCGGAAACAGGTCACTTGGTATTTGGCACATTGCATACAAGTTCGGCAGCGCAGACGGTTGAC
CGGATGGTGGATGTTTTTTCGCCTGAACAACAACAGCAAATCCGCGTTCAGTTATCTAACTCGCTCGTAGCTGTATTTAG
TCAAACGCTGGTACCGCGCAAAAATCCTAAACCAGGTGAATTTGGCAGAGTCATGGCGCAAGAAATCATGATTGTGACTC
CGGCGATCGCAAACTTAATTCGCGAAGGCAAAACCTCTCAAATCTACTCAGCAATTCAAACGGGTGGAAAACTAGGAATG
CAAACACTAGAAAAAGTTCTTGCTGATTTATATAAAGCCGGAACGATTTCTTTGGAAGCAGCAATGTCTAAAACCTCAAA
ACCTGATGAGTTACAGCGCCTGATTGGTGGTAATATACCCTCAGCACAGACAATGGCAGCTAGATCAGCTTCGGGTAAAC
CTGTACTTGTAAATTAA
ATGGATTACATGATTGAAGACCTTATGGAGCAAGTTATTGCTTGCGGAGGCTCCGATTTACACATTTCTACTGGTTTACC
TCCTTATATCCGTATCAGTGGCAAGTTGACTCCTACAGAGTACGAACCGTTAACGGCGGAACAATGCCAGCGGTTGATTT
TTACGATGTTAAATAATACACAGCGCAAGCACCTTGAGCAAAACTGGGAACTTGATTGCTCTTATGGAGTGCGAGGCTTA
GCACGTTTTCGTGTCAATGTTTACAAAGATCGCGGCACTTACGCAGCGTGTTTGCGGGCGCTTTCTTCCCAAATTCCCAG
TATGGATGCGTTGAAGCTACCAGATATTGTGCGGGAAGTTTCGGAAAAGCCAAGGGGATTAGTTTTAGTTACAGGTCCAA
CAGGTTCTGGGAAGTCAACAACGTTGGCGTCAATGATTAACAACATTAATATGACGCGATCGGAACACATCTTAACGATT
GAAGACCCGATTGAATTCGTTTACGAACCGATTCAAAGCTTAATTCATCAACGTCAAATCGGGGAAGATACCAAAAGTTT
TGCTAATGCTTTGAGAGCAGCGTTACGCGAAGATCCTGATGTGATTCTTGTCGGTGAAATGCGTGACTTAGAAACAATTT
CGCTAGCAATTTCTGCGGCGGAAACAGGTCACTTGGTATTTGGCACATTGCATACAAGTTCGGCAGCGCAGACGGTTGAC
CGGATGGTGGATGTTTTTTCGCCTGAACAACAACAGCAAATCCGCGTTCAGTTATCTAACTCGCTCGTAGCTGTATTTAG
TCAAACGCTGGTACCGCGCAAAAATCCTAAACCAGGTGAATTTGGCAGAGTCATGGCGCAAGAAATCATGATTGTGACTC
CGGCGATCGCAAACTTAATTCGCGAAGGCAAAACCTCTCAAATCTACTCAGCAATTCAAACGGGTGGAAAACTAGGAATG
CAAACACTAGAAAAAGTTCTTGCTGATTTATATAAAGCCGGAACGATTTCTTTGGAAGCAGCAATGTCTAAAACCTCAAA
ACCTGATGAGTTACAGCGCCTGATTGGTGGTAATATACCCTCAGCACAGACAATGGCAGCTAGATCAGCTTCGGGTAAAC
CTGTACTTGTAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.762 |
88.889 |
0.487 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.571 |
88.889 |
0.476 |
| pilT | Acinetobacter baylyi ADP1 |
51.297 |
91.799 |
0.471 |
| pilT | Legionella pneumophila strain Lp02 |
51.594 |
91.27 |
0.471 |
| pilT | Legionella pneumophila strain ERS1305867 |
51.594 |
91.27 |
0.471 |
| pilT | Acinetobacter baumannii D1279779 |
50.72 |
91.799 |
0.466 |
| pilT | Acinetobacter baumannii strain A118 |
50.72 |
91.799 |
0.466 |
| pilT | Acinetobacter nosocomialis M2 |
50.72 |
91.799 |
0.466 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50 |
92.593 |
0.463 |
| pilT | Neisseria gonorrhoeae MS11 |
50.432 |
91.799 |
0.463 |
| pilT | Neisseria meningitidis 8013 |
50.432 |
91.799 |
0.463 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50 |
89.947 |
0.45 |
| pilT | Vibrio cholerae strain A1552 |
50 |
89.947 |
0.45 |
| pilU | Acinetobacter baylyi ADP1 |
38.592 |
93.915 |
0.362 |