Detailed information NTG0549019

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: LRO88_RS19810
• Genome accession: NZ_CP089148
• Coordinates: 3631704..3634577 (-)
• Length: 957 a.a.
• NCBI ID: WP_124047888.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NIB353
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3626704..3639577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRO88_RS19780	yvlD	3627887..3628246 (-)	360	WP_003228066.1	phage holin family protein	-
LRO88_RS19785	yvlC	3628248..3628445 (-)	198	WP_003228065.1	PspC domain-containing protein	-
LRO88_RS19790	yvlB	3628450..3629547 (-)	1098	WP_159377102.1	DUF4097 family beta strand repeat-containing protein	-
LRO88_RS19795	yvlA	3629572..3629898 (-)	327	WP_032726939.1	protein YvlA	-
LRO88_RS19800	-	3630116..3630346 (+)	231	WP_003235419.1	hypothetical protein	-
LRO88_RS19805	hag	3630545..3631366 (-)	822	WP_029318328.1	flagellin Hag	-
LRO88_RS19810	uvrA	3631704..3634577 (-)	2874	WP_124047888.1	excinuclease ABC subunit UvrA	Machinery gene
LRO88_RS19815	uvrB	3634585..3636570 (-)	1986	WP_003228054.1	excinuclease ABC subunit UvrB	Machinery gene
LRO88_RS19820	csbA	3636756..3636986 (-)	231	WP_003228053.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106031.23 Da
• Isoelectric Point: 6.2777

>NTDB_id=549019 LRO88_RS19810 WP_124047888.1 3631704..3634577(-) (uvrA) [Bacillus subtilis strain NIB353]
MAMDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIVSGR
KGAHVKVLEQIRKQGYVRVRIDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
EEELMFSEHHACPHCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDADLVIPNQDLSLKENAVAPWTPISSQYYPQL
LEAVCTHYGIDMDVPVKNLPKHQLDKVLYGSGDDLIYFRYENDFGQIREGEIQFEGVLRNIERRYKETGSDFIREQMEQY
MSQKSCPTCKGYRLKKEALAVLIDGRHIGKITELSVADALAFFKDLTLSEKDMQIANLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGQVISAGTPEEVMEDPNSLTGSYLSGKKFIPLPPERRKPDGRYIEIKGASENNLKKVNAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEITEVEESYTGRYLKPVIERDKTRMKSLLKAKETATS

Nucleotide

• Length: 2874 bp

>NTDB_id=549019 LRO88_RS19810 WP_124047888.1 3631704..3634577(-) (uvrA) [Bacillus subtilis strain NIB353]
ATGGCTATGGATCGGATAGAGGTGAAGGGAGCCAGGGCGCATAACCTGAAAAATATAGATGTAACGATTCCGAGAGATCA
GCTTGTCGTTGTCACGGGTTTGTCCGGATCAGGTAAATCCTCCCTTGCCTTTGACACGATATATGCTGAAGGACAGAGAC
GGTATGTCGAGTCGCTGTCTGCTTATGCCCGCCAGTTTTTAGGGCAAATGGATAAGCCTGATGTGGATGCAATTGAGGGG
CTCTCTCCCGCCATCAGCATTGATCAGAAAACAACGAGCCGCAATCCGAGGTCTACTGTCGGTACGGTAACTGAGATTTA
TGATTATCTGCGTCTTTTATATGCGAGAGTAGGGAAGCCTCATTGTCCGGAACACGGAATTGAGATTACATCCCAGACCA
TCGAGCAAATGGTGGACAGAATTCTGGAATACCCGGAACGGACGAAGCTTCAGGTGCTGGCGCCGATTGTCTCGGGCCGA
AAAGGCGCTCATGTCAAAGTGCTTGAACAGATTAGAAAACAAGGCTATGTCAGAGTCAGAATTGACGGCGAGATGGCTGA
GCTTTCCGACGATATCGAATTAGAAAAGAACAAGAAGCATTCCATTGAGGTAGTCATTGACCGGATTGTCGTGAAAGAAG
GCGTGGCAGCCCGGCTGTCAGATTCATTGGAAACGGCGCTCCGTTTAGGTGAAGGACGGGTTATGATCGATGTCATCGGT
GAGGAAGAGCTGATGTTCAGCGAGCATCATGCCTGTCCGCACTGCGGATTTTCAATTGGTGAGCTTGAGCCGCGTCTGTT
TTCGTTTAACAGTCCGTTCGGGGCGTGTCCGACGTGTGACGGTCTCGGAATGAAGCTTGAAGTGGATGCCGATCTTGTCA
TCCCCAATCAAGATTTGTCATTGAAGGAGAATGCGGTCGCCCCTTGGACACCGATCAGCTCACAATATTATCCTCAGCTG
CTTGAGGCAGTCTGCACCCACTACGGGATTGATATGGATGTGCCGGTCAAAAATTTGCCGAAGCATCAACTGGATAAAGT
GCTGTACGGCAGCGGAGATGACCTGATTTATTTCCGATATGAAAATGATTTTGGACAAATCCGCGAAGGTGAAATTCAAT
TTGAAGGCGTATTGCGCAATATTGAAAGACGCTATAAGGAGACAGGCTCCGATTTCATACGTGAGCAAATGGAGCAGTAT
ATGTCTCAGAAGTCTTGTCCGACGTGCAAAGGCTATCGGTTAAAGAAAGAGGCGCTTGCCGTACTGATTGACGGCCGCCA
CATTGGAAAAATTACCGAGCTGTCTGTCGCCGACGCACTTGCCTTCTTTAAAGACCTTACCCTTTCTGAGAAGGATATGC
AGATCGCCAATTTGATTTTGCGCGAAATTGTGGAGCGCTTAAGCTTTCTGGACAAAGTCGGCCTCGATTACCTGACATTG
AGCAGGGCAGCGGGTACATTGTCCGGGGGAGAGGCACAGCGCATCAGGCTGGCGACTCAAATTGGCTCGCGTTTATCCGG
TGTGCTTTATATTTTAGATGAGCCGTCTATCGGTCTGCATCAGCGTGATAACGACCGCTTGATCAGCGCTCTGAAAAATA
TGAGAGACCTCGGGAACACGCTGATTGTTGTCGAACATGATGAGGACACGATGATGGCAGCAGATTATTTAATAGATATT
GGACCGGGAGCCGGCATTCACGGCGGACAGGTGATATCTGCGGGTACGCCGGAAGAAGTGATGGAAGATCCAAACTCATT
AACGGGCAGCTATTTATCAGGGAAAAAGTTTATCCCATTGCCTCCTGAAAGAAGAAAGCCGGACGGACGTTACATTGAAA
TTAAAGGTGCTTCAGAAAACAACCTGAAAAAAGTGAATGCCAAGTTCCCGCTTGGGACGTTTACAGCAGTTACAGGTGTT
TCCGGTTCAGGAAAGAGTACACTCGTTAATGAAATTTTGCATAAGGCGCTGGCGCAAAAGCTTCATAAAGCGAAAGCGAA
GCCTGGCAGCCATAAAGAGATTAAAGGTTTGGATCATTTAGACAAAGTCATTGACATTGACCAGGCGCCAATCGGAAGAA
CGCCGAGGTCCAACCCTGCGACATACACCGGTGTATTTGATGACATTCGTGATGTATTCGCGCAGACAAATGAAGCGAAG
GTCCGCGGCTATAAAAAAGGCCGTTTCAGCTTCAACGTGAAGGGCGGACGATGTGAAGCCTGCCGCGGAGACGGGATTAT
TAAAATTGAAATGCACTTCCTTCCTGACGTATACGTTCCATGCGAGGTGTGTCACGGCAAACGCTATAACCGTGAAACGC
TTGAAGTGACGTACAAAGGAAAAAGCATCTCTGATGTGCTTGATATGACAGTTGAAGATGCTCTTTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTCCAAACCCTTTATGATGTTGGTTTAGGTTATATTACGCTCGGCCAGCCGGCGACGAC
CTTGTCAGGCGGAGAAGCGCAGCGCGTGAAGCTCGCATCTGAGCTGCACAAACGCTCGACCGGACGCACGCTCTACATTT
TAGATGAGCCGACGACAGGTTTGCATGTCGACGATATCGCCAGGCTTCTTGTCGTGCTGCAACGGTTGGTAGACAACGGA
GACACTGTACTGGTTATTGAGCACAACCTTGATATCATTAAGACGGCCGATTACATTGTGGATTTGGGCCCGGAAGGCGG
AGCCGGGGGCGGAACCATTGTCGCGTCAGGAACGCCTGAGGAAATCACTGAAGTGGAAGAATCGTATACAGGCCGTTATT
TGAAGCCTGTTATCGAACGTGACAAAACACGCATGAAATCGCTCTTGAAAGCGAAAGAAACAGCTACATCTTAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

• UvrA interaction domain (UvrA_inter) (132-238)

• ABC transporter (ABC_tran) (622-858)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae TIGR4	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae D39	69.091	97.701	0.675