Detailed information NTG0054896

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: MIC7113_RS22450
• Genome accession: NC_019738
• Coordinates: 5466081..5467190 (-)
• Length: 369 a.a.
• NCBI ID: WP_015184477.1
• Uniprot ID: K9WLC2
• Organism: Allocoleopsis franciscana PCC 7113
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5461081..5472190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MIC7113_RS22435 (Mic7113_4666)	-	5461455..5464187 (-)	2733	WP_015184474.1	AMIN domain-containing protein	-
MIC7113_RS22440 (Mic7113_4667)	-	5464449..5465243 (-)	795	WP_015184475.1	hypothetical protein	-
MIC7113_RS22445 (Mic7113_4668)	-	5465240..5466076 (-)	837	WP_015184476.1	PilN domain-containing protein	-
MIC7113_RS22450 (Mic7113_4669)	pilM	5466081..5467190 (-)	1110	WP_015184477.1	type IV pilus assembly protein PilM	Machinery gene
MIC7113_RS22455 (Mic7113_4670)	-	5467806..5469092 (+)	1287	WP_015184478.1	sugar ABC transporter substrate-binding protein	-
MIC7113_RS22460 (Mic7113_4671)	-	5469117..5469392 (+)	276	WP_226883506.1	hypothetical protein	-
MIC7113_RS22465 (Mic7113_4672)	-	5469458..5470243 (+)	786	WP_015184480.1	alpha/beta hydrolase	-
MIC7113_RS22470 (Mic7113_4673)	-	5470330..5471016 (-)	687	WP_015184481.1	S-layer homology domain-containing protein	-
MIC7113_RS36760	-	5471334..5471480 (-)	147	WP_155898076.1	hypothetical protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 40403.30 Da
• Isoelectric Point: 4.3959

>NTDB_id=54896 MIC7113_RS22450 WP_015184477.1 5466081..5467190(-) (pilM) [Allocoleopsis franciscana PCC 7113]
MFNRFQGLFSKGKKGVGIELAPERINIAQLRKQGQGYKVATLYSHEVPDGIFQDGKIADSPALAELIRAALAESKLKVDR
VATAVPMREAIIRIIPIPAELDDQELRDMVLNHEAGLYLPYPREEVDLDYQKLGFFQDEDGIEKVQVLLVATRKEITDTY
LDTFGQAGLQVDVLEINSFALIRTMREQLRQFSPQEAAVLVDIEFDSTEIAIIVDGVPQFSRTVPIGTFQLQSALSRAMN
LPTSRNTELLQGMTIPPVPADGLGGRTGATGINPGMAALLRVLGELADELRRSIDFYLNQSDNLEVAQLLLAGPGGGIGQ
LDEFFTQRLSLPTTQVDPVIALSLEVDQEIPSVQRPGLGTVLGLGLREV

Nucleotide

• Length: 1110 bp

>NTDB_id=54896 MIC7113_RS22450 WP_015184477.1 5466081..5467190(-) (pilM) [Allocoleopsis franciscana PCC 7113]
ATGTTTAACCGTTTTCAAGGGCTGTTTTCCAAGGGCAAGAAAGGCGTCGGGATAGAATTGGCTCCAGAACGAATTAATAT
CGCTCAATTGCGAAAGCAGGGTCAGGGCTATAAGGTTGCCACCCTATACTCTCACGAGGTTCCGGATGGGATTTTCCAAG
ATGGGAAAATTGCCGACTCCCCAGCTTTAGCTGAACTGATTAGGGCAGCCTTAGCCGAGAGTAAACTCAAAGTTGATCGC
GTCGCCACTGCCGTACCGATGCGGGAAGCCATTATCCGCATTATCCCTATTCCCGCCGAGCTAGATGATCAAGAACTTCG
AGACATGGTACTCAACCATGAAGCGGGGCTGTATCTACCTTATCCCCGTGAAGAAGTAGACTTGGATTATCAGAAGCTGG
GCTTCTTTCAAGATGAAGATGGCATTGAAAAGGTGCAAGTCCTCTTAGTCGCCACTCGTAAGGAAATCACAGATACCTAT
CTGGATACATTTGGGCAAGCTGGATTACAGGTGGATGTATTGGAGATTAATAGCTTTGCCCTGATTCGGACGATGAGAGA
GCAACTGCGCCAGTTTTCTCCCCAAGAAGCCGCTGTCTTAGTGGATATTGAATTTGACAGCACTGAGATTGCGATCATTG
TCGATGGTGTTCCTCAATTTTCTCGTACCGTTCCCATCGGGACGTTCCAACTCCAGAGCGCTCTTTCACGAGCTATGAAT
TTACCAACCTCAAGGAACACAGAGTTGCTACAGGGGATGACGATTCCACCAGTTCCCGCTGATGGGTTAGGAGGACGAAC
TGGAGCTACAGGGATTAACCCAGGGATGGCAGCTCTGCTGAGAGTCTTGGGAGAACTCGCCGATGAACTGCGTCGCTCCA
TCGATTTTTATTTAAATCAGAGCGACAATCTAGAAGTCGCTCAGCTATTACTAGCCGGTCCTGGAGGTGGAATTGGACAA
CTGGATGAATTTTTCACCCAACGCTTAAGCTTACCTACTACTCAGGTAGACCCAGTGATTGCTCTTTCGCTGGAGGTTGA
CCAAGAAATTCCCTCAGTGCAACGACCGGGCTTAGGCACTGTACTGGGATTAGGATTACGAGAGGTTTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (285-367)

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

3D structure

• AlphaFold DB: K9WLC2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	70.924	99.729	0.707