Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   J4Q32_RS02515 Genome accession   NZ_CP071916
Coordinates   475925..476656 (+) Length   243 a.a.
NCBI ID   WP_000889919.1    Uniprot ID   A0A062WNF5
Organism   Streptococcus pneumoniae strain 19A-19087     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 470925..481656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4Q32_RS02485 (J4Q32_02465) dnaK 470942..472765 (+) 1824 WP_000034662.1 molecular chaperone DnaK -
  J4Q32_RS02490 (J4Q32_02470) - 472778..473131 (+) 354 WP_000115730.1 hypothetical protein -
  J4Q32_RS02495 (J4Q32_02475) dnaJ 473336..474472 (+) 1137 WP_001066299.1 molecular chaperone DnaJ -
  J4Q32_RS02500 (J4Q32_02480) - 474794..474988 (-) 195 WP_001808905.1 hypothetical protein -
  J4Q32_RS02505 (J4Q32_02485) - 475150..475437 (-) 288 WP_050168363.1 hypothetical protein -
  J4Q32_RS02510 (J4Q32_02490) - 475447..475857 (-) 411 WP_233922993.1 HIT family protein -
  J4Q32_RS02515 (J4Q32_02495) pptA 475925..476656 (+) 732 WP_000889919.1 ABC transporter ATP-binding protein Regulator
  J4Q32_RS02520 (J4Q32_02500) - 476653..477702 (+) 1050 WP_000653752.1 ABC transporter permease -
  J4Q32_RS02525 (J4Q32_02505) - 477870..478199 (-) 330 WP_000132575.1 hypothetical protein -
  J4Q32_RS02530 (J4Q32_02510) - 478475..478813 (+) 339 WP_000682122.1 LytTR family DNA-binding domain-containing protein -
  J4Q32_RS02535 (J4Q32_02515) comE/blpR 478818..479555 (+) 738 WP_001219126.1 response regulator transcription factor Regulator
  J4Q32_RS02540 (J4Q32_02520) - 479568..480908 (+) 1341 WP_000275284.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27012.49 Da        Isoelectric Point: 4.7737

>NTDB_id=548929 J4Q32_RS02515 WP_000889919.1 475925..476656(+) (pptA) [Streptococcus pneumoniae strain 19A-19087]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=548929 J4Q32_RS02515 WP_000889919.1 475925..476656(+) (pptA) [Streptococcus pneumoniae strain 19A-19087]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTACGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAGATGTTCCGTCTGGACCAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAAAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGTGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGATCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WNF5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712