Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   J4O68_RS03600 Genome accession   NZ_CP071876
Coordinates   737131..737757 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain GX4-8L     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 732131..742757
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4O68_RS03585 (J4O68_03585) helD 732370..734424 (-) 2055 WP_235155389.1 DNA helicase IV -
  J4O68_RS03590 (J4O68_03590) - 734547..734993 (+) 447 WP_003858149.1 YccF domain-containing protein -
  J4O68_RS03595 (J4O68_03595) yccS 735012..737174 (+) 2163 WP_003858151.1 YccS family putative transporter -
  J4O68_RS03600 (J4O68_03600) sxy/tfoX 737131..737757 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  J4O68_RS03605 (J4O68_03605) sulA 737975..738484 (+) 510 WP_003858155.1 SOS-induced cell division inhibitor SulA -
  J4O68_RS03610 (J4O68_03610) ompA 738841..739893 (+) 1053 WP_003858156.1 porin OmpA -
  J4O68_RS03615 (J4O68_03615) matP 739959..740411 (-) 453 WP_003858158.1 macrodomain Ter protein MatP -
  J4O68_RS03620 (J4O68_03620) - 740598..742358 (+) 1761 WP_003858160.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=548704 J4O68_RS03600 WP_023315767.1 737131..737757(-) (sxy/tfoX) [Enterobacter hormaechei strain GX4-8L]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=548704 J4O68_RS03600 WP_023315767.1 737131..737757(-) (sxy/tfoX) [Enterobacter hormaechei strain GX4-8L]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572