Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   J4G41_RS12935 Genome accession   NZ_CP071861
Coordinates   2697473..2698099 (+) Length   208 a.a.
NCBI ID   WP_013097255.1    Uniprot ID   A0A427KI93
Organism   Enterobacter cloacae strain GX1Z-1L     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2692473..2703099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4G41_RS12915 (J4G41_12905) - 2692873..2694633 (-) 1761 WP_040021614.1 Lon protease family protein -
  J4G41_RS12920 (J4G41_12910) matP 2694820..2695272 (+) 453 WP_013097258.1 macrodomain Ter protein MatP -
  J4G41_RS12925 (J4G41_12915) ompA 2695336..2696391 (-) 1056 WP_044158562.1 porin OmpA -
  J4G41_RS12930 (J4G41_12920) sulA 2696746..2697255 (-) 510 WP_013097256.1 SOS-induced cell division inhibitor SulA -
  J4G41_RS12935 (J4G41_12925) sxy/tfoX 2697473..2698099 (+) 627 WP_013097255.1 TfoX/Sxy family DNA transformation protein Regulator
  J4G41_RS12940 (J4G41_12930) yccS 2698056..2700218 (-) 2163 WP_167816617.1 YccS family putative transporter -
  J4G41_RS12945 (J4G41_12935) - 2700238..2700684 (-) 447 WP_058681830.1 YccF domain-containing protein -
  J4G41_RS12950 (J4G41_12940) helD 2700807..2702861 (+) 2055 WP_038985577.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24000.57 Da        Isoelectric Point: 9.2254

>NTDB_id=548540 J4G41_RS12935 WP_013097255.1 2697473..2698099(+) (sxy/tfoX) [Enterobacter cloacae strain GX1Z-1L]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEESAKYCVKNGSSFLTLMKRGRPILLN
YYRVDDGLWQDRERLLQLSSYALNAARKERIQRYQRNRLKDLPNLTFQLEVLLCEAGITNEDTLRSLGARTSWLKLRAKN
KALSIKVLFALEGAIEGLHEAALPAEIRRELTEWFNALPEPQENRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=548540 J4G41_RS12935 WP_013097255.1 2697473..2698099(+) (sxy/tfoX) [Enterobacter cloacae strain GX1Z-1L]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCATTGGGAGAAATTCATCATCGTGCGCT
TTTTGGTGGCTATACCCTGGCCGTCGATGAGGCGGTGTTTGCCATGGTGTCAGACGGTGAGCTTTACCTTCGCGCCTGTG
AGGAAAGTGCGAAGTACTGTGTAAAAAACGGATCCTCCTTTTTGACCTTAATGAAACGCGGCCGGCCGATCCTTCTCAAC
TATTATCGTGTGGATGACGGTCTCTGGCAGGACAGGGAGCGGCTGCTTCAGCTTTCCTCTTACGCGCTTAATGCCGCGCG
TAAAGAGCGCATCCAGCGCTACCAGCGAAACCGGCTAAAGGATCTGCCCAACCTGACTTTTCAGCTGGAAGTGCTGCTCT
GTGAAGCCGGGATTACCAACGAAGATACCCTCCGGTCGCTGGGAGCCAGAACGAGCTGGCTAAAGCTGCGGGCAAAAAAT
AAAGCGCTCAGTATCAAAGTACTGTTTGCCCTGGAAGGGGCGATTGAAGGCCTGCATGAAGCGGCACTCCCGGCGGAAAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCGCTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A427KI93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567