Detailed information NTG0548464

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: J4N38_RS13050
• Genome accession: NZ_CP071857
• Coordinates: 2763959..2767345 (+)
• Length: 1128 a.a.
• NCBI ID: WP_252035320.1
• Uniprot ID: A0A9Q8XG39
• Organism: Vibrio sp. SCSIO 43145
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2758959..2772345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4N38_RS13030 (J4N38_12960)	erpA	2759430..2759771 (-)	342	WP_239837774.1	iron-sulfur cluster insertion protein ErpA	-
J4N38_RS13035 (J4N38_12965)	hemL	2760027..2761319 (+)	1293	WP_239875155.1	glutamate-1-semialdehyde 2,1-aminomutase	-
J4N38_RS13040 (J4N38_12970)	-	2761581..2762666 (+)	1086	WP_239837776.1	AI-2E family transporter	-
J4N38_RS13045 (J4N38_12975)	rsmC	2762744..2763766 (+)	1023	WP_252035319.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
J4N38_RS13050 (J4N38_12980)	chiS	2763959..2767345 (+)	3387	WP_252035320.1	response regulator	Regulator
J4N38_RS13055 (J4N38_12985)	-	2768031..2769713 (+)	1683	WP_239865205.1	ABC transporter substrate-binding protein	-
J4N38_RS13060 (J4N38_12990)	-	2769885..2770871 (+)	987	WP_239865206.1	ABC transporter permease	-
J4N38_RS13065 (J4N38_12995)	-	2770874..2771899 (+)	1026	WP_239865207.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127364.07 Da
• Isoelectric Point: 5.9081

>NTDB_id=548464 J4N38_RS13050 WP_252035320.1 2763959..2767345(+) (chiS) [Vibrio sp. SCSIO 43145]
MFKLYRKQKFKRLQHTLMLAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLLSVRDSKQQQVVDYMYAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDIEQARDYAQRRYIQGSGDQIKTSILPQSKVYSGTERYRLLHKRYHRAYLELLKRSDF
DDVLLVDLEGNVTYSIYKHDNYGTNLLTGRFRDSNLGKTFHKLKTQVTEKRKTNEDYTPVIISDFEMDKGKPVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNNASAMKTLLVGADHRSRTMAYEQEDIDKSREVVDLALSGRTEVGTYINTVGEA
TIAAYSPISFKGVEWAIVVEVPEKEAFARVNQLETLFIFAMLCAIVLVVAASHYLSNFITAPLLKLTWAAEKVSAGDLDT
DIINTERKDEIGRLAVSFERMQRSIRDKMQLIKQQNEELESNLKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPITASHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETRAVDISGATRLVLELSSHLVGNKPIRI
INQVPTDPLWVSADPQRLEQVLYNLVGNAIKYTSEGKIVISATQVDDNIRVQVVDTGQGIPADQLEHIFEPLIQAGSDSS
RYRQGAGLGLSISRQLIDLMQGTLYVSSQPMVGTTFSFTLPIASVEQIAQINDIENAHFVAPESNNLELIESSNLPENPE
GPLLLIVDDEPVNLRVLDSFLRLEGYRVRTANNGEEAIGSVREEKPELLLLDIMMPGMSGYQVCETLRQDYDHAQLPVIM
LTALNQPDDRVRGFEAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENQQLQNELKQRAMVEASLLETQGRLLEQLE
SAPEAIICVRDDNKVRFTNDAASRLFKRTTEQLRRSSADELIAPKYLNVEQPHYCGVIDIYVEDVRQHLSADILKLPEGS
GLKSMYIFDVGGGVNAARITNLETAIEALSSYAFEGDKAKLQELKELGGEFTRLADRVTTDNKSKQEIMREVLVDSMTSA
LNYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEYILEHCKEMSPERTHIENLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=548464 J4N38_RS13050 WP_252035320.1 2763959..2767345(+) (chiS) [Vibrio sp. SCSIO 43145]
ATGTTTAAGTTGTATCGAAAACAAAAATTCAAGCGCCTGCAACATACTTTGATGCTAGCGTTTTTGGTGCTCAGCATTAC
CCCTCTCACCATTATCGCTATCTTCTTTTTACAATCTCACACCAAAGATCTGCAAGAACAAAGCACTTCGCACTTGCTCT
CAGTACGCGACAGCAAACAGCAACAAGTCGTCGATTATATGTATGCAAAAGAATCTGAAGTCATGGGGTTCGTTCGTTCA
GAATTGGCTTATGCGAGCGGTGGACGCTTTTATGGATTGGTCAATGCTTTTCGTAGCTTAGGGTTAGATATTGAACAAGC
ACGTGACTACGCCCAACGACGTTATATTCAAGGTTCAGGCGATCAAATAAAAACATCCATTCTTCCTCAGTCTAAGGTTT
ATAGTGGTACTGAACGCTACCGCCTACTGCATAAACGCTACCATCGTGCTTACCTAGAGCTTCTCAAACGCTCTGACTTT
GACGACGTCCTCCTAGTTGATTTAGAAGGTAATGTCACCTATTCGATCTACAAACACGATAACTACGGTACTAACCTCCT
CACTGGTCGTTTCCGCGATAGCAACCTAGGCAAAACTTTCCATAAGCTCAAAACTCAAGTCACCGAAAAGCGTAAGACCA
ATGAAGATTATACCCCTGTTATCATTTCTGATTTTGAAATGGATAAAGGGAAACCCGTTGCTTGGCTAGGTGCGCCCATA
ATTCAGCAAGGTTACCTCCATAGCTATGCCATGTTCCGCTTACCGAATAATGGCATCACTAAGCTGATCGCTGATACCAA
CAATGCTTCAGCTATGAAAACCTTGTTGGTAGGTGCCGACCATCGTTCACGCACCATGGCTTATGAGCAAGAAGACATCG
ACAAAAGTCGCGAAGTCGTAGACTTAGCGCTATCAGGAAGAACGGAAGTAGGTACTTACATCAATACAGTTGGAGAAGCG
ACTATTGCCGCTTACAGCCCGATATCTTTCAAAGGTGTAGAATGGGCAATTGTGGTTGAAGTTCCAGAAAAAGAAGCCTT
TGCTCGAGTGAATCAGCTCGAAACCCTCTTCATCTTCGCCATGTTATGTGCAATTGTACTGGTAGTCGCGGCATCGCATT
ACTTATCCAACTTTATTACCGCACCGCTTCTTAAGTTGACTTGGGCTGCAGAGAAAGTCTCAGCTGGCGACCTTGACACC
GATATCATCAATACTGAGCGTAAAGATGAAATTGGTCGTCTCGCGGTGAGCTTTGAACGTATGCAACGCTCCATCCGTGA
CAAAATGCAGCTCATCAAACAGCAAAATGAAGAACTGGAAAGCAATCTAAAACTGATTCAGAAGCAAAATGATGAATTAC
AGCTAGCCAACAAACTCAAAGACGAGTTTCTTGCCACAACTTCCCATGAATTACGCACGCCTTTGCATGGCATGGTTGGG
ATTGCCGAAGCCCTGATTTCAGGTGCGAATGGCCCCATCACCGCCAGCCACAAATATCAACTTGATATCATCATCAGTAG
TGGTCAAAGGCTGGCAACCTTAGTCGATGATTTACTTGATTATCACAAAATGCGTTATGGTAATCTGGATATCGAAACCC
GCGCAGTGGACATTTCTGGCGCAACACGATTGGTTTTGGAGCTGTCTTCTCACCTTGTCGGTAACAAGCCAATTCGCATT
ATCAACCAAGTTCCTACCGATCCTCTTTGGGTCAGTGCGGATCCACAACGTCTTGAGCAGGTACTGTATAACTTGGTTGG
CAATGCCATTAAGTACACCAGTGAAGGCAAAATCGTCATATCTGCCACTCAGGTTGATGATAATATCCGCGTACAAGTTG
TCGATACTGGCCAAGGTATACCAGCCGATCAACTGGAACATATCTTTGAGCCACTCATTCAAGCGGGTAGCGACAGCAGC
CGCTATCGACAAGGGGCAGGGTTAGGCCTATCCATTAGCCGACAGTTAATTGATTTGATGCAAGGTACGCTCTATGTGAG
CAGCCAGCCAATGGTCGGCACCACTTTCAGCTTCACTCTACCAATCGCATCAGTAGAGCAGATCGCTCAAATCAACGATA
TTGAGAACGCTCACTTCGTTGCACCGGAGAGCAATAATCTTGAACTCATAGAGAGTTCAAATTTGCCTGAAAACCCCGAA
GGGCCATTGTTATTGATTGTGGATGACGAACCGGTCAACCTACGTGTGTTAGACAGCTTCCTCCGTTTAGAAGGTTACCG
AGTACGTACGGCTAACAATGGGGAAGAAGCGATTGGCTCAGTTCGAGAAGAGAAGCCCGAACTTTTATTGCTCGATATCA
TGATGCCGGGTATGAGCGGCTATCAAGTGTGCGAAACGCTTCGACAAGATTACGACCACGCTCAATTACCTGTCATTATG
CTGACTGCATTAAATCAGCCTGACGATCGTGTACGTGGTTTTGAAGCCGGAGCGAACGATTACTTATCAAAGCCATTCAA
TAAACAGGAACTCGCCGCTCGAATAACCGCACACTTAACCGCCAGTAAGGCGGAGCAGCGCAGAATTGAAAATCAACAAT
TACAAAATGAGCTTAAACAGCGCGCCATGGTTGAAGCTAGCCTGCTGGAAACCCAAGGACGATTACTAGAACAGTTAGAG
TCTGCCCCAGAAGCTATTATCTGTGTGCGTGATGATAATAAAGTCCGTTTCACCAATGACGCGGCCTCAAGACTATTTAA
GCGCACAACCGAGCAGCTTAGACGCTCCAGCGCCGATGAACTTATCGCACCCAAATACCTTAATGTAGAACAGCCGCATT
ATTGTGGAGTCATTGATATATACGTGGAAGATGTTCGTCAGCATTTATCTGCGGATATTCTAAAGCTTCCCGAGGGATCT
GGGCTGAAATCCATGTATATTTTCGATGTCGGTGGTGGTGTGAATGCAGCACGCATTACCAATCTTGAAACAGCCATTGA
AGCGCTTTCCAGCTATGCCTTCGAAGGCGACAAAGCCAAACTTCAGGAATTAAAAGAACTCGGAGGTGAGTTCACACGCT
TGGCCGACCGCGTCACAACGGATAATAAGTCCAAACAGGAAATTATGCGTGAAGTATTGGTCGATTCCATGACAAGTGCC
CTGAATTACTGGGAAAGTGTCACGGGCCAAAGTAAGTTTGCATTTGCAGAGCAAAGTGGTTTGTGGCGAGTGTACCTTGA
CCGCAGTACATTACAAACTCGAACTCTAGATAAATATCTACGAGTCGAGACGTTGCCTAAAACACCTCGCTGGCGAACCG
TGTTGAGCTCATTAGAGTACATTTTGGAACACTGTAAAGAGATGAGCCCTGAGCGAACCCATATTGAAAACCTTCGTGAC
AAGCTTCAACACCTTCTCACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (725-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	78.901	100	0.789