Detailed information NTG0548414

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: J4N37_RS12915
• Genome accession: NZ_CP071855
• Coordinates: 2709791..2713177 (+)
• Length: 1128 a.a.
• NCBI ID: WP_010450108.1
• Uniprot ID: A0A2K7SNE8
• Organism: Vibrio sp. SCSIO 43153
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2704791..2718177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4N37_RS12895 (J4N37_12765)	erpA	2705136..2705477 (-)	342	WP_005439421.1	iron-sulfur cluster insertion protein ErpA	-
J4N37_RS12900 (J4N37_12770)	hemL	2705724..2707019 (+)	1296	WP_009707535.1	glutamate-1-semialdehyde 2,1-aminomutase	-
J4N37_RS12905 (J4N37_12775)	-	2707378..2708463 (+)	1086	WP_009707537.1	AI-2E family transporter	-
J4N37_RS12910 (J4N37_12780)	rsmC	2708540..2709562 (+)	1023	WP_252041125.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
J4N37_RS12915 (J4N37_12785)	chiS	2709791..2713177 (+)	3387	WP_010450108.1	response regulator	Regulator
J4N37_RS12920 (J4N37_12790)	-	2714022..2715704 (+)	1683	WP_010450110.1	ABC transporter substrate-binding protein	-
J4N37_RS12925 (J4N37_12795)	-	2715876..2716862 (+)	987	WP_038884262.1	ABC transporter permease	-
J4N37_RS12930 (J4N37_12800)	-	2716865..2717890 (+)	1026	WP_010450114.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127301.00 Da
• Isoelectric Point: 5.7766

>NTDB_id=548414 J4N37_RS12915 WP_010450108.1 2709791..2713177(+) (chiS) [Vibrio sp. SCSIO 43153]
MFKFYKKQKFKRLQNTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFNRLGQSEEESRENAQQRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKDAALGRTFKRLSEDVSARRKVNEDYTPVVISDFDVENGKQVAWLGAPI
IQQGYLHSYAMFRLPSNGITKLIAEINRDTPIETLLVGSDHKPRTINTKSNEINNSLIVVDKALQGETSVETYTNGVGED
IMAAFAPISNRGITWALVVQLPEKLAFARVHQLEKLFVIAMFIAIILVIIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNAELESNIKLIQKQNEDLQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGVIPASQKYQLDIIIKSGQRLASLVDDLLDYHKMRYGSMDIQKSAVNLPSATQLVLELSSHLLGNKTIRI
INQVPSDLVPVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAGVIDDHIRVQVVDTGQGIPAEQLEHIFEPLIQAGQDST
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPVASEDEISLTQNLSVRGHFQVPENGVEVNEEPSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVTDGPETLELVEKEKPELLLLDIMMPGMSGYQVCSELRKHYDHAELPVIM
LTALNQTEDRVRGFEAGANDYLSKPFNKHELAARIQAHLTASKAEQRRIENKQLESELKQRAQVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLRRSSADELIAPKYLTVKQPHYCGKIDIYVEDVRQNIEADILKLPEGS
GLDVMYIFNVGGGASATRIYNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQDLMREILVDTMIHA
LDYWESATGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLSSIEFILEHCKEQSPDRSHIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=548414 J4N37_RS12915 WP_010450108.1 2709791..2713177(+) (chiS) [Vibrio sp. SCSIO 43153]
ATGTTTAAGTTTTACAAAAAGCAGAAATTTAAGCGACTGCAGAATACTCTCATGACCGCATTTCTGGTCTTAAGTATTAC
GCCTTTGACGATCACTGCGATTTTCTTCCTACAATCACACAGTAAAGATTTACAAGAACAGAGTACATCTCATCTTCTCT
CTGTCCGTGATACTAAGCAGCAGCAAATCTTAGATTATTTTGCAGCCCAAGAAACCGAAGTCATGGGCTTTGTTCGTTCT
GAGCTCGCATACGCGAGCGGCGGACGCTTCTATGGTCTCGTGAATGCATTTAATCGCTTGGGTCAAAGTGAAGAAGAATC
TCGTGAAAATGCACAGCAACGCTACATAAAAGGTAGTGGTGATCAGATAAAAACGTCGATTTTACCCGAATCTTCCAATT
ACGTAGGTAGTGAGCGTTATCGACTACTACATAAACGTTATCACTGGGCATACCTAGAGCTGCTTAAACGTTCTGACTTC
AACGACATTCTATTGGTCGATATTGACGGCAACGTGACGTATTCAATCAACAAAGATGACAACTACGGTACCAACCTACT
AACAGGACGCTATAAAGATGCCGCTTTAGGCAGAACATTCAAGCGCCTATCTGAAGATGTAAGTGCTCGCCGTAAAGTCA
ATGAAGACTATACGCCAGTTGTTATTTCTGACTTTGATGTAGAAAACGGTAAACAAGTTGCTTGGCTTGGCGCTCCAATT
ATCCAACAAGGCTACCTACACAGCTATGCAATGTTCCGCCTACCGAGTAACGGGATCACCAAATTAATAGCGGAGATCAA
CCGTGACACTCCTATCGAAACTCTTTTAGTTGGGTCTGACCATAAACCAAGGACAATCAACACCAAAAGTAACGAAATTA
ACAATAGCTTAATCGTGGTTGATAAGGCGCTACAAGGTGAAACTAGCGTAGAAACTTACACCAATGGAGTGGGTGAAGAT
ATCATGGCTGCATTTGCGCCAATCAGCAATCGAGGGATTACTTGGGCGCTAGTAGTTCAATTGCCAGAAAAACTCGCCTT
TGCTCGCGTGCATCAATTAGAAAAGTTGTTTGTTATCGCGATGTTTATCGCCATTATTCTAGTGATTATTGCGTCGCACT
ACCTATCTAACTTCATCACTTCCCCTTTACTTAAGCTGACTTGGGCAGCAGAGAAAGTATCCGCTGGTGATCTAGATGAA
ACGACTTTTAATACTGAACGAAAAGACGAAATCGGTCGCCTGGCAATCAGCTTCGAACGAATGCAGCGCTCTATCCGCGA
AAAAATCCAGACGATTAAACAACAAAATGCAGAACTAGAGAGCAACATTAAACTCATTCAAAAGCAAAATGAGGATTTGC
AGCTCGCTGATAAGCTCAAAGATGAATTCCTTGCCACCACTTCTCACGAGTTAAGAACACCATTACATGGGATGGTTGGC
ATTGCCGAGACATTAGTTTCTGGAGCGAATGGAGTCATTCCCGCGAGCCAGAAATACCAGCTCGATATCATTATTAAAAG
TGGCCAACGACTCGCCAGCCTAGTTGACGACCTACTTGATTACCATAAGATGCGCTACGGCAGTATGGATATTCAAAAAT
CTGCCGTTAACTTACCAAGTGCTACGCAACTGGTTCTTGAGCTGTCTAGCCACTTGTTAGGCAACAAAACGATTCGGATT
ATCAATCAAGTTCCTAGTGATCTTGTTCCAGTATCGGCCGACCCTCAGCGCTTAGAACAAGTTCTCTATAACCTTATTGG
CAATGCGATTAAGTACACATCTGAAGGTAAAATTGTTATTTCAGCAGGTGTGATAGACGATCACATCCGAGTGCAAGTTG
TAGATACAGGACAAGGGATACCAGCGGAGCAATTAGAGCACATCTTTGAACCTCTGATTCAAGCAGGCCAAGACTCCACC
CGATACCGCCAAGGTGCTGGGCTCGGCCTATCGATCAGCCGTCAATTGATTGAACTGATGGGCGGCTCTCTCTACGTGAG
TAGCCAGCCGATGGTTGGTACTACATTTAGTTTCACGCTACCTGTAGCAAGTGAAGATGAGATCTCTCTGACTCAAAACC
TTTCAGTTCGTGGCCATTTCCAGGTGCCAGAAAACGGAGTCGAAGTAAATGAGGAGCCTTCACTTCCAGAGAACCCGGAC
GGTCCACTACTGTATGTTGCTGATGATGAGCCTGTAAACCTACGTGTGCTAGAAAGCTTCTTACGGCTTGAAGGCTACCG
AGTAAGAACGGTAACCGATGGTCCAGAAACACTAGAACTTGTTGAGAAAGAAAAACCTGAGCTGTTATTGCTTGATATCA
TGATGCCTGGAATGAGTGGCTACCAAGTTTGTAGCGAACTACGTAAACACTACGATCATGCCGAGCTTCCCGTCATTATG
CTCACTGCACTCAATCAAACTGAAGATCGTGTTCGAGGATTTGAAGCTGGCGCGAATGACTATTTATCCAAGCCATTCAA
TAAGCATGAACTAGCAGCAAGGATTCAAGCACATTTAACCGCAAGTAAGGCAGAGCAACGTCGAATCGAGAACAAGCAGC
TTGAGAGTGAACTAAAGCAACGCGCTCAAGTAGAAGCTAGCTTGCTAGAAACTCAAGGGCGACTTTTAGAGCAGCTAGAG
TCTGCTCCTGAAGCGATCATATGTTTACGGGAAGACCAACGAATTCGATTTGCGAATGAGGCTGCCTGCAAACTGTTCAA
GCGCAGCCTAGAACAGTTGCGACGCTCATCTGCAGACGAGCTTATCGCCCCTAAATATTTGACCGTTAAACAGCCTCATT
ACTGCGGAAAAATTGATATTTATGTTGAAGATGTTCGCCAAAATATTGAAGCGGATATCCTCAAGCTTCCTGAAGGTTCA
GGCCTCGACGTCATGTATATCTTTAACGTTGGAGGGGGGGCAAGCGCGACTCGAATTTACAATCTGGAAACAGCTGTAGA
AGTATTGTCTAGCTATGCATTTGACGGCGATAAAGACCAACTACAAAAGCTGAAGGAACTGGGTGGCGAGTTTACACGCC
TAGCTGATAAAGCTCTGGGTAACAAGAAGGATAAGCAGGATCTAATGCGGGAAATACTGGTTGATACCATGATTCATGCC
CTAGATTACTGGGAGTCTGCTACCGGAGAGAGTAAATTTGCTTTTGCAGAACAAAGCGGCCTTTGGCGAGTGTACTTAGA
CAGAAGCACCCTCCAAACACGAACCTTAGATAAATACCTACGTATCGAGACGCTACCTAAGACACCTCGTTGGCGAACGG
TACTAAGCTCTATAGAGTTTATTCTTGAGCATTGTAAAGAACAAAGCCCCGATCGTAGCCACATTGAAGCACAGCGCGAT
AAACTGCAGAGGTTACTCACTAGCTAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (726-836)

3D structure

• AlphaFold DB: A0A2K7SNE8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.765