Detailed information NTG0548320

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: J4N45_RS02550
• Genome accession: NZ_CP071850
• Coordinates: 495553..498939 (-)
• Length: 1128 a.a.
• NCBI ID: WP_252013431.1
• Uniprot ID: -
• Organism: Vibrio sp. SCSIO 43140
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 490553..503939

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4N45_RS02545 (J4N45_02540)	acnB	492855..495452 (+)	2598	WP_252013414.1	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	-
J4N45_RS02550 (J4N45_02545)	chiS	495553..498939 (-)	3387	WP_252013431.1	response regulator	Regulator
J4N45_RS02555 (J4N45_02550)	rsmC	499176..500198 (-)	1023	WP_252013433.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
J4N45_RS02560 (J4N45_02555)	-	500265..501350 (-)	1086	WP_234494518.1	AI-2E family transporter	-
J4N45_RS02565 (J4N45_02560)	hemL	501681..502973 (-)	1293	WP_128648001.1	glutamate-1-semialdehyde 2,1-aminomutase	-
J4N45_RS02570 (J4N45_02565)	erpA	503289..503630 (+)	342	WP_042475971.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126828.61 Da
• Isoelectric Point: 5.4748

>NTDB_id=548320 J4N45_RS02550 WP_252013431.1 495553..498939(-) (chiS) [Vibrio sp. SCSIO 43140]
MLKLRRKQKFKRLQNTLMMAFLVLSITPLTIIALFFLNAHSQDLRDQSTSHLVSLRDTKQQQLLNYFQAQESEAMGFVRS
ELAYASGGRFYGLVNAFQRLGDDVEQARKHAQERYIQGSGDKIKTAILPDSSSFVGSERYRLLHKRYHRAFMEHLKRSDF
DDIILVDLSGNVTYSVYKYDYFGTNLETGDFSTQVLGETFKRLKSEVSSKRKENEEYTPVIVSDFARYNDKQYAWIGAPI
IQQGYLHSYAMFRLPISGITKLVTDGTPADIDILLVGSDHSAKLLGLTPETIANSDKVIAMALSGISDVSSYQSALGKDY
FAAFTPIALGTTHWALVVETPEAIAFASVEQLETLFVIAMLTAIVVVVAASHYLSNFITSPLLKLTWAAERASGGDLEPS
IISLERGDEIGRLALSFERMRRSIKDKIELIKSQNQELEQSLAIIKKQNEELQVADKLKDEFLATTSHELRTPLHGMIGI
AEAMISGANGPIGANHKYQLDIIVNSGQRLASLVDDLLDYHKMRYGSLDIERSALSLTSTTQLVIELSNHLIGDKKIRII
NQVLEPLPYVSADPQRLEQVLYNLLGNAIKYTNEGKIVLSATAMNDHIRVQVVDTGQGIPAQQLEHIFEPLVQAGHDSGH
YRQGAGLGLSISRQLIELMGGSLYVSSQPHVGTTFSFTLPLATQEEIEKQSQTNSVSHFQIAESTELQLEEEEVLPENPD
GPVLLIADDEPVNLRILESFLRLEGYQVRLAKDGIEALEQIEKEKPELLLLDIMMPGMSGFEVCEAVREKYDHAALPVIM
LTALNQPEDRVRGFELGANDYLAKPFSKPELAARIAAHLQASKAEERRAENQTLKYELKQRALVEASLLETQGRLIEQLD
NAPEAILCIREDLKVQFANQSAARLFKRTIEQLKRASIEELIAPKFIHLNQEHYFGEIDAFVDDVRQHINADVLTLPQGS
GLKSIYIFEQGQSLDASRVKNLETAIDALSTYAIEGDKAKLRELKELGGEFTRLADKAEGEEKSRPEIMREVLVETMTSS
LSYWEEVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRLETLPKTPRWRTVLSSVEYILEHCHKQGPERDYIISLRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=548320 J4N45_RS02550 WP_252013431.1 495553..498939(-) (chiS) [Vibrio sp. SCSIO 43140]
ATGTTGAAGTTGCGTCGCAAACAGAAGTTCAAACGGTTGCAAAATACCTTGATGATGGCGTTTTTGGTGTTAAGTATTAC
GCCGCTGACGATCATCGCTTTGTTCTTTCTAAACGCACACAGCCAAGATCTCCGCGATCAAAGCACCTCTCATCTCGTTT
CACTGCGCGACACCAAACAACAACAGCTACTCAACTATTTCCAAGCGCAAGAATCTGAAGCCATGGGGTTTGTTCGCTCT
GAGCTTGCCTACGCAAGTGGTGGACGCTTCTATGGCCTGGTCAATGCATTTCAACGTCTTGGTGACGATGTAGAGCAAGC
GAGAAAGCATGCCCAGGAGCGCTATATTCAAGGCTCTGGTGATAAGATCAAAACCGCGATTCTCCCTGATTCCAGCAGTT
TTGTTGGCAGTGAGCGCTACCGACTATTGCACAAACGTTATCATCGAGCTTTTATGGAGCACCTAAAGCGCTCCGATTTT
GACGACATCATTTTAGTGGATCTATCGGGTAACGTGACCTACTCGGTATACAAATACGACTACTTTGGTACCAATCTAGA
AACCGGTGATTTTTCGACGCAGGTATTAGGCGAAACCTTTAAGCGCCTCAAGTCAGAGGTCAGCAGCAAACGCAAAGAAA
ATGAAGAGTACACGCCTGTCATTGTCTCGGATTTTGCTCGCTACAATGACAAACAGTACGCTTGGATCGGCGCACCCATC
ATACAGCAAGGCTATCTTCACAGTTATGCCATGTTCCGCTTGCCGATAAGTGGCATCACCAAACTTGTCACTGACGGCAC
ACCAGCAGACATTGATATTCTTTTAGTTGGTAGCGATCACTCGGCGAAATTACTCGGACTCACGCCAGAAACTATCGCCA
ACAGTGACAAAGTCATCGCCATGGCGCTATCAGGTATCTCGGATGTCAGCAGCTATCAAAGTGCCCTAGGTAAAGATTAC
TTTGCCGCGTTCACTCCTATTGCGCTAGGCACGACACACTGGGCGTTAGTTGTCGAAACGCCAGAAGCCATCGCGTTTGC
TAGCGTAGAACAGCTTGAAACCTTATTTGTGATCGCCATGCTCACCGCCATCGTTGTGGTAGTTGCTGCCTCGCATTACC
TGTCTAACTTCATTACCTCACCACTTCTCAAGCTAACATGGGCAGCGGAGCGTGCCTCTGGTGGCGATCTCGAACCTTCC
ATTATTAGCCTAGAGCGCGGTGACGAAATTGGTCGCTTGGCATTGAGCTTTGAGAGAATGAGACGCTCAATTAAAGACAA
GATTGAGCTGATTAAGAGTCAAAACCAAGAGCTCGAACAGAGCCTTGCCATCATCAAGAAACAAAATGAGGAGTTGCAGG
TTGCTGACAAACTCAAAGATGAGTTCCTAGCCACCACCTCTCATGAACTTCGAACCCCACTGCACGGCATGATAGGCATC
GCTGAGGCAATGATCTCTGGTGCGAATGGACCTATCGGGGCGAATCACAAGTACCAGCTAGACATTATCGTCAACAGTGG
ACAGCGCCTCGCAAGCTTAGTCGACGACCTTCTCGATTATCACAAAATGCGTTATGGCAGCCTGGATATAGAACGCTCTG
CACTTAGCTTAACCAGCACCACGCAACTGGTCATCGAGCTTTCTAATCACCTGATCGGTGATAAAAAAATTCGCATAATC
AATCAGGTACTTGAGCCTCTTCCTTATGTATCGGCAGATCCGCAACGTTTGGAACAGGTACTGTATAACCTACTCGGCAA
TGCCATTAAATACACCAACGAGGGTAAGATCGTTCTCTCTGCCACGGCCATGAACGACCACATTCGCGTTCAGGTCGTCG
ATACAGGTCAAGGCATTCCTGCCCAGCAACTTGAACACATTTTTGAGCCACTCGTTCAAGCTGGGCACGATTCAGGTCAC
TATCGTCAAGGCGCAGGCCTAGGGCTCTCTATCAGTCGTCAATTAATTGAACTGATGGGCGGCTCACTCTACGTCAGTAG
TCAACCGCATGTTGGCACGACTTTTAGCTTCACGCTTCCTCTTGCGACCCAAGAAGAAATTGAAAAACAATCTCAAACCA
ACAGCGTCAGTCACTTTCAGATCGCGGAATCCACAGAGTTGCAGCTCGAAGAGGAAGAAGTACTGCCAGAGAACCCTGAT
GGTCCTGTGCTGTTGATCGCCGATGATGAGCCGGTTAACCTTCGAATCCTCGAGAGCTTCTTAAGACTTGAAGGTTATCA
AGTCAGGCTTGCAAAAGACGGCATAGAGGCCTTAGAGCAGATTGAAAAAGAGAAACCAGAGCTACTGCTTCTCGATATTA
TGATGCCAGGAATGAGTGGCTTTGAAGTGTGTGAAGCCGTGCGAGAGAAATATGATCATGCCGCCCTGCCCGTTATTATG
CTGACCGCACTTAACCAACCAGAGGATAGAGTGCGCGGTTTCGAGCTCGGCGCCAATGACTATTTAGCGAAACCGTTCAG
CAAGCCAGAGCTCGCAGCCCGTATCGCGGCGCATCTGCAAGCCAGTAAAGCCGAGGAGCGTCGCGCCGAAAACCAAACCC
TTAAGTACGAACTCAAACAGCGAGCATTAGTGGAGGCAAGTCTACTCGAGACACAAGGCCGTTTAATAGAACAGCTTGAT
AATGCGCCTGAAGCCATCTTGTGTATTCGCGAAGATTTAAAGGTACAGTTTGCTAACCAAAGCGCGGCTCGATTATTCAA
GCGTACCATCGAGCAACTGAAACGAGCCAGCATCGAAGAGTTGATTGCACCTAAGTTTATCCACCTCAATCAAGAACATT
ACTTTGGCGAAATCGACGCCTTCGTCGACGATGTACGTCAGCATATCAATGCCGATGTTCTTACTCTACCGCAAGGTTCA
GGTCTGAAAAGTATCTATATCTTCGAGCAGGGACAATCCCTTGATGCAAGCAGAGTGAAGAACCTAGAGACCGCCATCGA
TGCACTTTCTACTTACGCTATTGAGGGCGATAAAGCCAAACTCAGAGAGCTCAAAGAGCTTGGTGGCGAGTTTACTCGCT
TGGCAGATAAGGCTGAAGGCGAAGAAAAATCTCGACCAGAAATCATGCGTGAAGTCCTCGTTGAGACTATGACAAGCTCA
CTAAGTTACTGGGAAGAGGTGACTGGACAGTCCAAGTTTGCTTTTGCAGAGCAAAGTGGTCTTTGGCGCGTCTATCTTGA
TAGAAGCACACTGCAAACCAGAACACTCGACAAGTATTTAAGGCTAGAAACCTTGCCGAAGACACCGAGGTGGCGCACGG
TACTCAGCTCGGTAGAGTACATTCTAGAGCACTGCCACAAGCAAGGGCCTGAGCGAGATTACATCATTAGCCTACGAGAT
AAGCTGCAGCGATTACTCACCAGCTAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Response regulator receiver domain (Response_reg) (725-835)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• HAMP domain (HAMP) (374-425)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	70.771	100	0.708