Detailed information NTG0548308

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: J4N39_RS16540
• Genome accession: NZ_CP071849
• Coordinates: 405215..406696 (-)
• Length: 493 a.a.
• NCBI ID: WP_252025958.1
• Uniprot ID: -
• Organism: Vibrio sp. SCSIO 43136
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 400215..411696

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4N39_RS16520 (J4N39_16530)	-	400285..401691 (-)	1407	WP_252025952.1	oligosaccharide flippase family protein	-
J4N39_RS16525 (J4N39_16535)	-	401684..402844 (-)	1161	WP_252025953.1	glycosyltransferase family 4 protein	-
J4N39_RS16530 (J4N39_16540)	-	402849..404015 (-)	1167	WP_252025954.1	glycosyltransferase family 4 protein	-
J4N39_RS16535 (J4N39_16545)	-	404128..405234 (-)	1107	WP_252025956.1	glycosyltransferase family 4 protein	-
J4N39_RS16540 (J4N39_16550)	luxO	405215..406696 (-)	1482	WP_252025958.1	sigma-54 dependent transcriptional regulator	Regulator
J4N39_RS16545 (J4N39_16555)	-	406804..409203 (-)	2400	WP_252025960.1	response regulator	-
J4N39_RS16550 (J4N39_16560)	-	409282..409965 (-)	684	WP_252025962.1	CpsD/CapB family tyrosine-protein kinase	-

Sequence

Protein

• Length: 493 a.a.
• Molecular weight: 54995.03 Da
• Isoelectric Point: 5.3041

>NTDB_id=548308 J4N39_RS16540 WP_252025958.1 405215..406696(-) (luxO) [Vibrio sp. SCSIO 43136]
MQAKVLLVEDSTSLAILYKEYVKDEPYDMFHVETGKEAMTFIERHMPQLVILDLKLPDMSGEDILDWINEKQFPTSVVIA
TAHGSVNIAVNLLTKGAEDFLEKPITAERLKASVSLHLKKAKLETLVDDLEQKFDRHNFHGFIGSSLPMQAVYKIVESAA
PTTASVFICGESGTGKEVCAEALHRESNRKDKPFVAINCGAIPKDLMESEIFGHVKGAFTGATTDRLGAARQAHGGTLFL
DELCEMELEMQKKLLRFLQTGTLTPLGSSKEVKVDVRIICATNRNPLDEVEQGRFREDLYYRVHVIPVDMPPLRDRGKDI
LELSRHFLQMYAKQDGKKFTGFKREVESVLKRYNWPGNVRQLQNIIRNIVVLNDGKQVELNQLPAPLNQPAALKAAAAEP
EPTPIAMPASTPEIQTPSLEASEVEVSAPEKPSSDISAGDIKPMWMVERETIQRAIEFCDGNVLNAAVLLDLSPSTVYRK
KQAWESENDTQQA

Nucleotide

• Length: 1482 bp

>NTDB_id=548308 J4N39_RS16540 WP_252025958.1 405215..406696(-) (luxO) [Vibrio sp. SCSIO 43136]
ATGCAGGCTAAGGTGTTACTGGTTGAAGATTCCACTTCACTAGCCATCCTTTACAAAGAATATGTAAAGGATGAGCCGTA
TGACATGTTTCATGTCGAAACCGGTAAGGAGGCGATGACTTTTATCGAACGTCATATGCCTCAGTTGGTGATTCTCGACC
TTAAGCTGCCAGACATGTCTGGCGAAGATATCTTAGACTGGATTAACGAAAAACAATTTCCCACCAGCGTTGTCATTGCC
ACTGCGCATGGCTCAGTCAACATTGCGGTCAATCTGTTGACTAAAGGCGCTGAAGATTTCCTTGAAAAACCCATTACTGC
TGAGCGCTTAAAAGCATCGGTTTCACTCCATTTGAAAAAAGCCAAGCTAGAAACTTTGGTCGACGATCTTGAGCAAAAAT
TTGATCGTCACAATTTTCATGGCTTTATAGGTTCCAGCCTGCCCATGCAAGCGGTCTACAAAATTGTGGAGTCTGCCGCC
CCAACCACAGCCAGTGTATTCATTTGCGGTGAAAGCGGCACGGGTAAAGAAGTATGTGCAGAAGCCTTACACCGAGAAAG
CAACCGCAAAGATAAGCCCTTTGTCGCCATCAACTGTGGTGCAATCCCAAAAGATCTTATGGAGAGCGAGATTTTTGGCC
ACGTTAAAGGAGCATTTACTGGAGCGACCACCGACCGACTCGGCGCAGCTAGACAAGCCCACGGCGGCACACTGTTTCTC
GATGAGCTATGTGAAATGGAACTAGAGATGCAGAAAAAACTGCTGCGATTCCTTCAGACCGGAACCCTCACACCACTAGG
CAGCAGTAAAGAAGTAAAAGTCGATGTTCGCATTATTTGTGCCACCAACCGTAACCCTCTTGATGAGGTAGAACAAGGCC
GATTCCGTGAAGACCTATACTACCGCGTGCATGTGATACCTGTTGATATGCCGCCCCTCCGAGATCGCGGAAAAGACATC
CTAGAATTGTCACGTCACTTCTTACAAATGTATGCTAAGCAAGACGGTAAGAAGTTTACCGGTTTCAAACGGGAAGTAGA
GAGCGTATTAAAGCGCTACAACTGGCCGGGTAACGTAAGGCAATTACAAAATATTATTCGCAATATCGTGGTGCTTAACG
ATGGCAAACAAGTCGAACTTAACCAACTGCCTGCACCACTCAACCAACCTGCGGCGCTCAAGGCGGCAGCGGCTGAACCT
GAGCCAACGCCAATCGCAATGCCAGCATCTACCCCAGAAATACAGACACCATCATTGGAAGCGTCTGAGGTAGAGGTATC
AGCACCTGAAAAGCCAAGCAGTGACATCTCAGCTGGAGATATCAAACCAATGTGGATGGTCGAGCGCGAGACCATTCAGC
GAGCAATAGAATTTTGTGATGGCAACGTCTTAAACGCTGCTGTGTTACTCGACCTCAGCCCCTCTACTGTGTATAGAAAG
AAACAGGCTTGGGAGTCTGAGAATGATACTCAGCAAGCGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-114)

• Bacterial regulatory protein, Fis family (HTH_8) (444-480)

• Sigma-54 interaction domain (Sigma54_activat) (143-308)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	52.401	97.16	0.509