Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EXW36_RS20595 Genome accession   NZ_CP071811
Coordinates   4031431..4032225 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides strain JAS15/1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4026431..4037225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW36_RS31225 - 4026979..4027077 (-) 99 Protein_4036 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  EXW36_RS20570 (EXW36_20570) - 4027316..4027591 (-) 276 WP_002129035.1 hypothetical protein -
  EXW36_RS20575 (EXW36_20575) - 4027632..4028237 (-) 606 WP_002167693.1 hypothetical protein -
  EXW36_RS20580 (EXW36_20580) - 4028221..4028376 (-) 156 WP_002129038.1 hypothetical protein -
  EXW36_RS20585 (EXW36_20585) - 4028413..4028985 (-) 573 WP_002138281.1 DUF1629 domain-containing protein -
  EXW36_RS20590 (EXW36_20590) - 4029028..4030683 (-) 1656 WP_002184991.1 AHH domain-containing protein -
  EXW36_RS20595 (EXW36_20595) spo0A 4031431..4032225 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  EXW36_RS20600 (EXW36_20600) spoIVB 4032512..4033804 (-) 1293 WP_002129041.1 SpoIVB peptidase -
  EXW36_RS20605 (EXW36_20605) recN 4033924..4035663 (-) 1740 WP_002088564.1 DNA repair protein RecN Machinery gene
  EXW36_RS20610 (EXW36_20610) argR 4035934..4036383 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=548071 EXW36_RS20595 WP_002015081.1 4031431..4032225(-) (spo0A) [Bacillus mycoides strain JAS15/1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=548071 EXW36_RS20595 WP_002015081.1 4031431..4032225(-) (spo0A) [Bacillus mycoides strain JAS15/1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATCGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818