Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   CSB63_RS02555 Genome accession   NZ_CP089060
Coordinates   462319..463125 (+) Length   268 a.a.
NCBI ID   WP_134973115.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CH8     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 457319..468125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSB63_RS02535 (CSB63_0480) tuf 458368..459564 (+) 1197 WP_002949971.1 elongation factor Tu -
  CSB63_RS02540 (CSB63_0481) tpiA 459813..460571 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  CSB63_RS02545 (CSB63_0482) tmk 460809..461438 (+) 630 WP_002946312.1 dTMP kinase -
  CSB63_RS02550 (CSB63_0483) - 461447..462322 (+) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  CSB63_RS02555 (CSB63_0484) yaaT 462319..463125 (+) 807 WP_134973115.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  CSB63_RS02560 (CSB63_0485) yabA 463112..463432 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  CSB63_RS02565 (CSB63_0486) rsmI 463435..464301 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  CSB63_RS02570 (CSB63_0487) - 464438..465673 (+) 1236 WP_022096936.1 ammonium transporter -
  CSB63_RS02575 (CSB63_0488) - 465684..466025 (+) 342 WP_041826978.1 P-II family nitrogen regulator -
  CSB63_RS02580 (CSB63_0489) - 466123..466779 (+) 657 WP_011225604.1 glycoside hydrolase family 73 protein -
  CSB63_RS02585 (CSB63_0490) - 466802..467623 (+) 822 WP_082308846.1 Cof-type HAD-IIB family hydrolase -
  CSB63_RS02590 - 467642..468112 (-) 471 Protein_447 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29767.17 Da        Isoelectric Point: 4.6485

>NTDB_id=548026 CSB63_RS02555 WP_134973115.1 462319..463125(+) (yaaT) [Streptococcus thermophilus strain CH8]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVHLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=548026 CSB63_RS02555 WP_134973115.1 462319..463125(+) (yaaT) [Streptococcus thermophilus strain CH8]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCATCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414