Detailed information NTG0054782

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: OSCIL6304_RS11370
• Genome accession: NC_019693
• Coordinates: 2794770..2795885 (+)
• Length: 371 a.a.
• NCBI ID: WP_015148579.1
• Uniprot ID: K9TGF3
• Organism: Oscillatoria acuminata PCC 6304
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2789770..2800885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSCIL6304_RS11355 (Oscil6304_2302)	-	2790126..2792387 (+)	2262	WP_015148576.1	CHAT domain-containing tetratricopeptide repeat protein	-
OSCIL6304_RS11360 (Oscil6304_2303)	-	2792463..2792930 (-)	468	WP_015148577.1	MgtC/SapB family protein	-
OSCIL6304_RS11365 (Oscil6304_2304)	-	2793192..2794493 (-)	1302	WP_015148578.1	sugar ABC transporter substrate-binding protein	-
OSCIL6304_RS11370 (Oscil6304_2305)	pilM	2794770..2795885 (+)	1116	WP_015148579.1	type IV pilus assembly protein PilM	Machinery gene
OSCIL6304_RS11375 (Oscil6304_2306)	-	2795887..2796693 (+)	807	WP_015148580.1	PilN domain-containing protein	-
OSCIL6304_RS11380 (Oscil6304_2307)	pilO	2796690..2797538 (+)	849	WP_015148581.1	type 4a pilus biogenesis protein PilO	-
OSCIL6304_RS11385 (Oscil6304_2308)	-	2797791..2800109 (+)	2319	WP_015148582.1	type IV pilus secretin family protein	-
OSCIL6304_RS11390 (Oscil6304_2309)	-	2800545..2800826 (+)	282	Protein_2274	HU family DNA-binding protein	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 40619.42 Da
• Isoelectric Point: 4.0940

>NTDB_id=54782 OSCIL6304_RS11370 WP_015148579.1 2794770..2795885(+) (pilM) [Oscillatoria acuminata PCC 6304]
MVNFFKKFLSKGSNGIGLEIAPERLNIVQLRQQGASYQLETYATAEVPEGVVEEGLIADPPEMAQLIQETLAEHNLTNIK
RVATAVPAREGVIRIIPVPKELNDLELREYMNQEAGLYLPFPREEADVDFQKLGEFMDEDGIEKVQVLLVATRKEVTDTY
ISTFQEAGLGIEILEISSFALLRTIREQLLQLPPEEAVVLTDIQFDSTEIAIVVDGIPQFSRTIPIGTYQVQTALSQAMN
LPPSRNTDMLQGMTIPANPTESTGSGTMGGGSSPGTQAIIKVFSELGDELRRSIDFYMNQSEGLEVGQLLLAGPGASIGG
LDDFFNQRLSLLSLVVDPVENLALEVDEEKMPLMQRPGLGVVLGLAMREAK

Nucleotide

• Length: 1116 bp

>NTDB_id=54782 OSCIL6304_RS11370 WP_015148579.1 2794770..2795885(+) (pilM) [Oscillatoria acuminata PCC 6304]
GTGGTTAATTTCTTTAAAAAATTCCTGTCTAAAGGATCCAATGGAATTGGACTGGAAATTGCTCCAGAACGACTCAATAT
CGTGCAACTGCGTCAACAAGGTGCCTCTTATCAACTAGAAACCTATGCCACGGCGGAAGTCCCCGAAGGCGTTGTGGAAG
AAGGGTTGATTGCAGACCCCCCGGAGATGGCTCAACTGATCCAAGAAACCCTAGCGGAACACAATTTAACGAATATCAAG
CGGGTCGCTACGGCTGTACCGGCGCGGGAAGGGGTGATTCGGATTATTCCAGTTCCCAAAGAACTGAATGATTTGGAATT
GCGGGAGTACATGAACCAAGAGGCGGGACTCTATTTGCCATTTCCCCGAGAAGAGGCGGATGTGGACTTCCAAAAATTAG
GGGAGTTCATGGATGAGGATGGCATCGAAAAGGTCCAGGTGCTGCTGGTAGCGACTCGCAAGGAAGTGACGGATACTTAT
ATTAGTACCTTTCAAGAAGCTGGGTTAGGGATAGAAATTCTGGAGATTTCTAGTTTTGCTCTGTTACGGACCATTCGAGA
ACAATTGCTACAGTTACCCCCAGAAGAGGCGGTGGTACTGACTGATATTCAGTTTGATAGTACCGAAATTGCGATCGTGG
TGGATGGGATTCCGCAGTTTTCCCGAACTATCCCGATCGGGACCTATCAGGTACAAACGGCCCTATCTCAAGCGATGAAT
TTACCGCCTTCTCGCAATACGGATATGTTGCAGGGGATGACGATTCCGGCTAACCCAACAGAAAGTACGGGCTCAGGTAC
AATGGGGGGAGGAAGTAGCCCGGGAACGCAGGCTATTATTAAAGTGTTTTCTGAGTTAGGGGACGAACTGCGGCGCTCAA
TTGATTTTTATATGAATCAGAGCGAAGGATTAGAGGTCGGACAGCTCCTGCTGGCAGGACCGGGCGCATCGATTGGAGGG
TTGGATGACTTTTTCAATCAGCGATTAAGTTTATTAAGCCTAGTAGTAGATCCAGTGGAGAATTTAGCCCTGGAAGTAGA
TGAAGAAAAAATGCCCCTAATGCAGCGCCCAGGATTGGGAGTTGTGCTGGGGTTAGCCATGCGGGAGGCCAAGTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (285-369)

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

3D structure

• AlphaFold DB: K9TGF3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	59.03	100	0.59