Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J1M35_RS04610 Genome accession   NZ_CP071796
Coordinates   973176..973562 (+) Length   128 a.a.
NCBI ID   WP_208010091.1    Uniprot ID   A0A975CJL1
Organism   Ottowia testudinis strain 27C     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 968176..978562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1M35_RS04585 (J1M35_04585) purH 968193..969797 (+) 1605 WP_208010086.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  J1M35_RS04590 (J1M35_04590) - 969834..970382 (-) 549 WP_208010087.1 hypothetical protein -
  J1M35_RS04595 (J1M35_04595) hemL 970601..971905 (-) 1305 WP_208010088.1 glutamate-1-semialdehyde 2,1-aminomutase -
  J1M35_RS04600 (J1M35_04600) - 971889..972824 (-) 936 WP_208010089.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  J1M35_RS04605 (J1M35_04605) - 972924..973094 (+) 171 WP_208010090.1 rubredoxin -
  J1M35_RS04610 (J1M35_04610) pilG 973176..973562 (+) 387 WP_208010091.1 response regulator Regulator
  J1M35_RS04615 (J1M35_04615) - 973562..973927 (+) 366 WP_208010092.1 response regulator -
  J1M35_RS04620 (J1M35_04620) - 973932..974462 (+) 531 WP_208010093.1 chemotaxis protein CheW -
  J1M35_RS04625 (J1M35_04625) - 974631..976739 (+) 2109 WP_243457657.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14203.30 Da        Isoelectric Point: 5.8682

>NTDB_id=547807 J1M35_RS04610 WP_208010091.1 973176..973562(+) (pilG) [Ottowia testudinis strain 27C]
MSSKRVLVIDDSNTIRRSAEIFLKQGGHEVMLAEDGFDALAKVNDAQPDVIFCDILMPRLDGYQTCAIIKRNEKFADTPV
VMLSSKDGVFDKARGRMVGSQEYLTKPFTKDQLLQAVQQFASANQGAM

Nucleotide


Download         Length: 387 bp        

>NTDB_id=547807 J1M35_RS04610 WP_208010091.1 973176..973562(+) (pilG) [Ottowia testudinis strain 27C]
ATGTCATCAAAGCGAGTGCTCGTCATTGACGACAGCAACACGATTCGGCGCAGCGCAGAGATTTTTCTCAAGCAAGGTGG
CCACGAGGTCATGCTGGCAGAGGACGGTTTCGATGCCCTCGCCAAAGTCAATGACGCGCAGCCGGACGTCATCTTCTGCG
ACATCCTGATGCCGCGACTTGATGGTTATCAGACTTGCGCCATCATCAAGCGCAATGAAAAATTCGCCGATACGCCTGTC
GTTATGCTGTCGTCCAAGGACGGCGTGTTCGACAAGGCGCGTGGTCGAATGGTCGGTTCGCAGGAATATTTGACCAAACC
GTTTACCAAGGACCAGCTGCTGCAGGCCGTGCAGCAATTCGCGTCCGCCAACCAAGGAGCTATGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

60.504

92.969

0.562