Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   J4G46_RS04560 Genome accession   NZ_CP071771
Coordinates   957660..962231 (+) Length   1523 a.a.
NCBI ID   WP_208012266.1    Uniprot ID   -
Organism   Acinetobacter towneri strain GX7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 952660..967231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4G46_RS04535 (J4G46_04535) - 953124..953768 (-) 645 WP_180064460.1 hypothetical protein -
  J4G46_RS04540 (J4G46_04540) pilG 954044..954427 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  J4G46_RS04545 (J4G46_04545) - 954460..954828 (+) 369 WP_004975526.1 response regulator -
  J4G46_RS04550 (J4G46_04550) - 954832..955368 (+) 537 WP_104852339.1 chemotaxis protein CheW -
  J4G46_RS04555 (J4G46_04555) - 955415..957490 (+) 2076 WP_179988579.1 methyl-accepting chemotaxis protein -
  J4G46_RS04560 (J4G46_04560) chpA 957660..962231 (+) 4572 WP_208012266.1 Hpt domain-containing protein Regulator
  J4G46_RS04565 (J4G46_04565) - 962235..962693 (+) 459 WP_004975530.1 hypothetical protein -
  J4G46_RS04570 (J4G46_04570) dapE 962775..963908 (-) 1134 WP_208012267.1 succinyl-diaminopimelate desuccinylase -
  J4G46_RS04575 (J4G46_04575) - 964050..964196 (-) 147 WP_096901466.1 entericidin A/B family lipoprotein -
  J4G46_RS04580 (J4G46_04580) - 964317..965201 (-) 885 WP_180005966.1 DUF1853 family protein -
  J4G46_RS04585 (J4G46_04585) - 965289..965669 (+) 381 WP_104852333.1 YbaN family protein -
  J4G46_RS04590 (J4G46_04590) elsL 965679..966203 (+) 525 WP_004968267.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1523 a.a.        Molecular weight: 168852.49 Da        Isoelectric Point: 4.2064

>NTDB_id=547673 J4G46_RS04560 WP_208012266.1 957660..962231(+) (chpA) [Acinetobacter towneri strain GX7]
MKEILKNLVETMTLPEDSYLEQDAEILEIFVEEIEEIFEELNPLFTTWFANPTDQETLVTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVLSGAVTLNTDIQKYAKTVLNIYQYKLYPIFKQVGLIDLDLRPLVLLGQQLQQKSPEPALEELLVLA
DQLTATDMPTGLELTDAAVETAAVAAVESSEDVMTAEEMPQTEVAQEEAADASLLAETLAIFVEEAEEHLATIDQFLAQD
QIYSQDYNGLIRALHTLRGSSSMAQIDQVFQASSKVENLFKAFVQDEIESTSKETALLVQYAEFVRDYLHVLRQGHCDGL
DVIYATFNKAWDSYGFSTSDTEDSNPQGLVSKLIELNIDRLLDAEFEFDKLAQAQFPSYLEELSAQAQLLVEHTDNRASV
GIHQFTEELKAAYDSVLAKPILLNSEYGYELFAQAHQEFIHLFDTLAAGQRVTVTEDIQKTLNDLTAFVQQDIDAIALED
AETSVSDNAVETTVVAEPEAVPAAVASENSGTVNLAQLSQRIASDQQNMHADDANKDFDPDLLDIFLEEAEELLVGMDED
VNTWSKDASDTSALNNLMRYLHTLKGGANMISATHIGLIAHNLESIYERIINNQIVVSPALIQIIRLVQDDIADRIQTIR
DERVDYAAPESIAILGNIVSLAQGDADVSVASATTAAQPEQTIEAVEEVDAQPELAVEALQDTTADLAEDDAVIADDAHF
EDAAAAAFEPITETVSLEASAESEDEQLHSIVVETFREEAEEILDAADQRLKQWFEQRSDRSILLQLQRAAHSLKGGARM
AEIESVAQIAYQLESAFEQFAVHQFNSNVYDALLQTTLAWLRDAIFKADYSNYDSLKSSLSAMQFVDVSAQLPERLTHTD
LLSPSRSYEFVQGDGTEPPAMSGEWGETTQLDNSNEMIRISADLVEKMIDLSGENSINRSRIEMELGQLGGTLNEMELAI
KRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSR
IQAEIQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPTELVVYNTEGELDRTILERLVTPFEHMLRNAVDHGIEDPAQR
AAANKPEVGKIELNITRQGTDVVVTFVDDGKGIDDAKIKEKALSLGLIKADQNLDKNEILQYIFHPGFTTAQSVTQISGR
GVGLDVVQSEIKALGGHVSVDSTLGQGTTFSIRVPTTVAVSDALMVKVGDQQFAVPLAQIDRIVRIAPTTLESYFNSNED
FFQIDNQNYKLRYLSEFVGNQPLPRLSHVGHSLPVLLIKGSTGQTIALLVDQLIGSRGQIVVKPIGQQFSSIGAIAGATI
LGDGQVCLILDGQNIARQILATQRTKQASDQRDSQRRDTRRLIMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAMEQL
ENVKPDLMLLDIEMPRMDGFEVTNLVRHHDMHSNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEQLLAV
SQG

Nucleotide


Download         Length: 4572 bp        

>NTDB_id=547673 J4G46_RS04560 WP_208012266.1 957660..962231(+) (chpA) [Acinetobacter towneri strain GX7]
ATGAAAGAAATATTAAAAAATTTAGTCGAAACAATGACGCTTCCTGAAGATAGTTATCTTGAGCAAGATGCGGAAATTCT
TGAAATTTTTGTCGAAGAAATTGAAGAAATCTTCGAAGAATTAAATCCATTATTTACTACTTGGTTTGCGAACCCAACAG
ATCAAGAAACTTTAGTGACTATTCGTCGTCACTTTCACACTTTAAAAGGCTCGGGTCGCATGGTGGGTGCGAAGTCTGCG
GGCGAATTGGCATGGACGGTTGAAGATACTTTAAACCGTGTGCTTTCGGGTGCGGTAACACTCAATACTGATATTCAAAA
ATACGCAAAAACTGTTTTAAATATTTATCAATACAAGCTTTATCCAATTTTTAAGCAAGTCGGTTTAATTGATCTTGATT
TACGCCCATTGGTGCTTTTAGGACAACAATTACAGCAAAAAAGTCCTGAACCTGCATTGGAAGAGTTGCTGGTTTTAGCA
GATCAACTGACTGCCACTGATATGCCGACAGGACTAGAATTGACGGATGCTGCAGTTGAAACAGCAGCTGTCGCAGCAGT
TGAATCATCTGAAGATGTAATGACTGCTGAAGAAATGCCGCAGACAGAAGTTGCACAAGAAGAGGCTGCTGATGCGAGTC
TATTGGCTGAAACTCTGGCTATTTTTGTAGAAGAAGCTGAAGAGCATTTAGCGACCATTGATCAGTTCTTGGCACAAGAT
CAGATTTACTCACAAGACTATAATGGCTTAATCCGTGCATTACATACACTGCGCGGCAGTTCGTCTATGGCGCAAATTGA
TCAAGTTTTTCAAGCCAGTTCTAAAGTTGAAAACTTGTTTAAAGCGTTTGTACAAGATGAAATTGAATCTACATCAAAAG
AAACTGCGCTGTTGGTGCAATATGCAGAATTTGTCCGGGATTATCTGCATGTACTTCGTCAAGGTCACTGTGATGGTTTA
GATGTAATCTATGCAACTTTTAATAAAGCATGGGATAGCTACGGCTTTAGCACCAGCGATACAGAAGACTCTAATCCTCA
AGGTTTAGTATCGAAGCTAATCGAACTGAATATTGATCGTTTACTTGATGCCGAATTTGAATTTGATAAATTGGCGCAAG
CGCAATTCCCAAGCTATTTAGAAGAACTCAGCGCACAAGCACAATTATTGGTAGAGCATACCGATAACCGTGCGTCTGTG
GGTATCCATCAATTTACTGAAGAACTTAAAGCCGCTTACGACAGTGTTTTAGCCAAACCAATTCTGCTTAACTCTGAATA
TGGTTATGAGTTATTTGCACAGGCACACCAAGAGTTTATTCATTTATTCGATACCTTGGCTGCGGGACAGCGTGTTACGG
TTACAGAAGACATTCAGAAAACCTTAAATGACTTAACTGCATTTGTGCAGCAAGACATTGATGCAATTGCACTTGAAGAT
GCTGAAACATCAGTGAGCGACAATGCTGTAGAAACAACAGTTGTTGCAGAACCTGAAGCGGTGCCTGCTGCAGTTGCTAG
CGAAAATTCGGGCACAGTGAATTTGGCGCAATTGTCACAACGTATTGCATCAGATCAACAAAACATGCATGCCGATGATG
CCAACAAAGACTTCGATCCTGACTTGCTGGATATCTTCTTGGAAGAAGCAGAAGAGCTTTTGGTGGGTATGGATGAAGAT
GTCAATACTTGGTCAAAAGACGCCAGCGATACTTCGGCTTTAAACAACTTAATGCGTTATTTGCACACTTTAAAAGGTGG
TGCAAATATGATTTCTGCGACGCATATTGGTTTAATTGCACACAACCTTGAGTCGATTTACGAGCGTATCATTAACAACC
AAATTGTTGTTTCACCTGCGTTAATTCAAATTATTCGTTTGGTGCAAGATGATATTGCAGACCGTATTCAGACCATTCGT
GATGAGCGTGTGGACTATGCTGCGCCAGAGTCGATTGCAATTTTAGGCAACATTGTTAGCTTGGCACAAGGCGATGCAGA
TGTGTCAGTTGCAAGTGCGACAACCGCAGCGCAGCCTGAACAGACTATTGAGGCAGTAGAAGAGGTTGATGCACAGCCTG
AGTTGGCGGTAGAAGCGTTGCAAGATACAACTGCAGATTTAGCTGAAGATGACGCAGTTATTGCTGATGATGCACATTTT
GAAGACGCTGCTGCTGCGGCATTTGAGCCGATCACAGAAACTGTAAGTCTTGAAGCAAGTGCTGAATCTGAAGATGAGCA
ATTACATTCAATTGTGGTTGAGACTTTCAGAGAAGAAGCGGAAGAAATTTTGGATGCTGCAGATCAGCGCTTGAAACAAT
GGTTTGAACAGCGTAGTGACCGAAGTATCTTGCTTCAATTACAACGTGCGGCGCACAGCTTAAAAGGCGGTGCACGTATG
GCTGAAATTGAGTCTGTTGCGCAAATCGCCTATCAACTTGAAAGTGCCTTTGAACAGTTTGCTGTGCATCAATTTAACTC
AAATGTTTATGATGCTTTATTGCAAACCACGTTGGCGTGGTTGCGTGATGCAATCTTCAAAGCAGATTACAGCAATTATG
ACAGCTTAAAATCTAGCTTGTCGGCGATGCAGTTTGTAGATGTATCTGCGCAATTGCCCGAGCGTTTAACGCATACCGAC
TTGTTATCGCCAAGCCGTAGTTATGAGTTTGTTCAGGGTGATGGTACAGAGCCACCTGCAATGTCGGGTGAGTGGGGCGA
AACCACACAGCTGGATAATAGCAATGAGATGATTCGTATCTCTGCCGATTTAGTCGAGAAGATGATTGACTTGTCAGGCG
AGAACTCGATTAACCGTTCACGTATTGAAATGGAGCTTGGGCAACTAGGCGGTACGTTGAATGAGATGGAATTGGCGATT
AAACGTCTTGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAATCGCAAATTATTGCCAAGCATGGTTCTGAAAACTC
ACGTTATGCAGACTTTGACCCATTAGAGATGGACCAATATTCATCGTTGAATCAGTTGTCTAAATCTCTGGCGGAATCTG
CATCGGACTTGGTGGACTTTAAGAGCACCTTGGCTGAAAAAATTCGTGATGCCGAAGGTTTGTTATTACAACAATCACGT
ATTCAGGCTGAAATTCAAGAAAGCTTGATGCGTACACGCCTTGTACCATTCTCACGTTTATTGCCACGTTTACAACGTAT
TGTGCGTCAGACTTCATCGACCTTAAACCGTCCGACAGAACTGGTGGTTTATAACACTGAAGGTGAATTAGACCGTACCA
TTCTAGAGCGTTTGGTGACACCGTTTGAACACATGCTGCGCAACGCGGTCGACCATGGGATTGAAGACCCTGCACAACGT
GCTGCAGCCAATAAACCTGAAGTTGGTAAAATTGAACTGAACATTACCCGTCAAGGCACAGATGTTGTGGTGACTTTTGT
GGATGATGGTAAGGGTATTGATGATGCCAAGATTAAAGAAAAAGCATTGAGCTTAGGTTTAATCAAAGCCGATCAGAATT
TAGATAAAAACGAAATTCTGCAATACATTTTCCACCCAGGCTTTACAACAGCACAATCGGTTACACAAATTTCAGGTCGT
GGCGTTGGTTTAGACGTGGTGCAAAGTGAGATTAAGGCGCTCGGCGGTCACGTTTCTGTAGATTCAACATTAGGTCAAGG
CACAACCTTTAGTATTCGTGTACCAACGACGGTTGCGGTATCCGATGCCTTAATGGTTAAAGTTGGTGATCAACAATTTG
CTGTACCGTTGGCGCAAATTGACCGTATTGTACGTATTGCACCAACCACTTTGGAATCTTACTTCAACAGCAATGAAGAT
TTCTTCCAAATTGACAACCAGAACTACAAGTTACGTTACTTATCTGAGTTCGTTGGCAATCAGCCATTACCGCGTTTAAG
CCATGTGGGTCATTCACTACCTGTTCTGTTAATTAAAGGCAGCACAGGTCAAACCATTGCTTTACTAGTCGATCAGTTGA
TTGGTTCGCGTGGTCAAATTGTTGTGAAACCAATTGGACAACAGTTCTCAAGCATTGGTGCAATTGCAGGCGCAACTATT
TTGGGTGATGGTCAAGTTTGTTTGATTTTGGATGGTCAGAACATTGCCCGTCAAATTCTTGCAACGCAACGTACTAAACA
AGCCAGCGATCAACGTGATAGCCAACGTCGTGATACACGCCGCTTAATTATGATTGTGGATGACTCAGTCACCGTACGTA
AAGTAACTTCACGTCTGCTTGAGCGTCAAGGTTATGACATCGTGACTGCCAAAGATGGTGTCGATGCCATGGAGCAGCTT
GAAAACGTCAAACCTGACTTGATGTTACTGGATATTGAAATGCCACGTATGGATGGTTTTGAGGTGACTAACCTTGTACG
CCACCACGACATGCATAGCAATCTGCCGATCATCATGATTACGTCACGTACAGGTGAAAAACACCGCGAACGAGCGTTTA
GCTTGGGTGTGACGCACTACATGGGTAAACCGTTCCAAGAGGCAGAATTGCTTGCCAATATTGAACAATTATTAGCAGTT
AGTCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.166

100

0.613