Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   J4G45_RS12515 Genome accession   NZ_CP071770
Coordinates   2380931..2383153 (+) Length   740 a.a.
NCBI ID   WP_180079865.1    Uniprot ID   -
Organism   Acinetobacter towneri strain GX5     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2375931..2388153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4G45_RS12490 (J4G45_12495) tusA 2376102..2376359 (-) 258 WP_004975955.1 sulfurtransferase TusA -
  J4G45_RS12495 (J4G45_12500) - 2376557..2377396 (+) 840 WP_207973878.1 CBS domain-containing protein -
  J4G45_RS12500 (J4G45_12505) lnt 2377393..2378949 (+) 1557 WP_207973877.1 apolipoprotein N-acyltransferase -
  J4G45_RS12505 (J4G45_12510) gspG 2379062..2379496 (-) 435 WP_004975950.1 type II secretion system major pseudopilin GspG -
  J4G45_RS12510 (J4G45_12515) gspF 2379573..2380778 (-) 1206 WP_004975948.1 type II secretion system inner membrane protein GspF -
  J4G45_RS12515 (J4G45_12520) priA 2380931..2383153 (+) 2223 WP_180079865.1 primosomal protein N' Machinery gene
  J4G45_RS12520 (J4G45_12525) - 2383226..2385067 (+) 1842 WP_131261089.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  J4G45_RS12525 (J4G45_12530) hslO 2385118..2385993 (+) 876 WP_004975941.1 Hsp33 family molecular chaperone HslO -
  J4G45_RS12530 (J4G45_12535) - 2386252..2386716 (+) 465 WP_004975938.1 DUF2147 domain-containing protein -
  J4G45_RS12535 (J4G45_12540) - 2386926..2387387 (+) 462 WP_004975935.1 DUF2147 domain-containing protein -
  J4G45_RS12540 (J4G45_12545) - 2387770..2388105 (+) 336 WP_096901332.1 chaperone modulator CbpM -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83810.03 Da        Isoelectric Point: 8.7648

>NTDB_id=547639 J4G45_RS12515 WP_180079865.1 2380931..2383153(+) (priA) [Acinetobacter towneri strain GX5]
MPDSTLDPQPVYRIRVAVPVYLYDCFDYMLSAAQYQQAEVGARVLVSFGRQNLVGIIVEKLALDTPIDPRFKLKAISELL
DEQAILDPKVLTLLTWSAQYYQFPIGEVMQSALPSLLRQAKPYNLLARTWKLLDAHAETKITRSEKQQEAYKILKLHPSG
TSENILNLAGIETATLKALANKEICACVLEAQDFSPMPVTLAQMPLTPNPDQKKAIDSVLKVRQQYKAFLLDGLTGSGKT
EVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPVILGSATPSIDSYALVDQGKMQCLELNQRAGTALMPKIHL
IDLKIAKKQHGISQQLIDEIKKRLAKKEQVLVFLNRRGYAPVLICESCAWQAKCPNCDANFTLHHQPYTHLHCHHCGTIH
RKPEQCPACNHAELKPIGMGTAKVEDSLNELFPNVDVIRVDRDSTSRVGSWQKIYDRIQRSEPLILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGDVYLQSVRPDHPLLTTLVEGDYRKFAKQSLKERKAAQL
PPYRYSALIRCESKSQELNQQFLQQHAQWLREHSEQLIEIWGPIPAPMERKAGRFHAHMVLLSKDRARLHFYIRNWWQNM
LHEKPSSMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=547639 J4G45_RS12515 WP_180079865.1 2380931..2383153(+) (priA) [Acinetobacter towneri strain GX5]
ATGCCAGATTCCACTTTAGACCCACAGCCTGTTTATCGTATTCGAGTGGCTGTACCCGTATATCTTTACGACTGCTTCGA
TTATATGCTCAGTGCAGCACAATATCAGCAAGCAGAAGTGGGCGCGCGGGTCTTGGTTTCTTTTGGTCGGCAAAACTTGG
TCGGAATTATTGTCGAAAAACTGGCACTCGACACCCCAATTGATCCACGTTTTAAACTCAAAGCCATTAGCGAACTGTTA
GATGAGCAAGCGATTTTAGACCCTAAAGTTTTAACTTTGTTGACATGGTCGGCACAATATTATCAATTCCCGATTGGTGA
AGTGATGCAAAGCGCCTTGCCTAGTTTATTGCGCCAAGCCAAACCCTATAATTTATTGGCACGCACTTGGAAATTATTGG
ACGCACATGCCGAAACTAAAATTACACGCTCGGAAAAACAACAAGAAGCCTATAAAATTTTAAAGCTGCATCCTTCGGGA
ACTTCTGAAAATATTTTAAATTTGGCAGGCATTGAAACAGCAACCCTAAAAGCCTTGGCGAATAAAGAAATTTGCGCATG
TGTTTTGGAAGCCCAAGATTTTAGCCCAATGCCAGTGACTTTGGCGCAAATGCCTTTAACCCCTAATCCAGATCAGAAAA
AAGCCATCGACAGCGTACTTAAAGTACGGCAGCAATATAAGGCATTTTTACTGGATGGTTTAACGGGTAGCGGTAAAACT
GAAGTGTACTTACACATCATGCATGAGGTACTAAAACAGGGCAAACAAGTGTTGGTGTTAGTACCTGAAATTGGTCTAAC
GCCACAAACCATTAGCCGTTTCCAATCGCGTTTTCACTGCCACATCGCCCTCTTACATTCAGGTTTAAATGATTCCAAGC
GTTTGCAGGCGTGGCAAGCCGCACAAACGGGCAAAGCCTCGATTATTTTAGGTACACGTTCTGCGATTTATACCCCATTG
CCAAATTTAGGCTTGATTATTTTAGATGAAGAACACGACCTGTCTTTTAAACAGCAGGAAGGTTTTCGCTACCATGCCCG
TGATGTTGCGCTCTATCGTGCCCATCTGGAAAATTGCCCTGTTATTTTAGGTTCGGCAACTCCAAGCATTGACAGCTATG
CACTAGTCGATCAAGGCAAAATGCAATGTCTGGAATTAAATCAACGCGCGGGCACGGCACTCATGCCCAAAATCCACCTG
ATTGATTTAAAAATTGCCAAAAAACAGCACGGTATTAGCCAACAATTGATTGATGAAATCAAAAAACGCTTGGCTAAAAA
AGAACAAGTTTTGGTGTTTTTAAACCGACGCGGCTATGCACCCGTATTGATTTGTGAGAGCTGTGCATGGCAAGCCAAAT
GCCCGAATTGTGATGCCAACTTTACCTTGCATCATCAACCTTATACACATTTGCATTGCCACCACTGCGGTACGATTCAT
CGTAAACCTGAGCAATGCCCTGCCTGCAACCATGCAGAACTCAAACCAATTGGCATGGGCACTGCCAAAGTCGAAGACAG
TTTAAACGAGCTGTTTCCCAATGTAGATGTGATTCGGGTAGATCGTGACTCAACCAGTCGTGTTGGCAGTTGGCAAAAAA
TTTATGACCGTATTCAACGCAGCGAACCACTGATTTTATTGGGCACGCAAATGCTGGCCAAAGGGCATCATTTTCCGTAT
GTGACATTGGTGGCAATTTTAGATATTGATTCAGGCTTACTTAGTGTGGATATTCGCGCACCTGAACGCACGGCTCAACT
GATTGTGCAAGTGGCGGGACGTGCAGGGCGTGGTGAGCATAAAGGTGATGTTTATTTGCAAAGTGTGCGTCCTGATCATC
CACTTCTCACCACATTAGTCGAGGGAGATTACCGCAAGTTCGCCAAACAAAGTTTAAAAGAACGCAAAGCTGCACAATTA
CCGCCTTATCGTTACAGTGCTTTGATTCGCTGTGAATCTAAAAGTCAGGAATTAAACCAGCAATTTTTACAACAACATGC
ACAATGGCTTAGAGAACATTCAGAACAATTAATTGAAATTTGGGGGCCGATTCCTGCGCCAATGGAACGTAAAGCAGGAC
GTTTCCATGCACACATGGTGTTGTTGTCTAAAGATCGGGCACGCTTACATTTTTATATCAGGAACTGGTGGCAAAATATG
TTGCATGAAAAGCCATCCAGCATGAAACTAAGTTTAGATATAGATCCGCAAGAATTTAGCTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(207-369)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

73.279

100

0.734