Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | LRX86_RS08180 | Genome accession | NZ_CP088895 |
| Coordinates | 1719714..1720820 (+) | Length | 368 a.a. |
| NCBI ID | WP_001187346.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain DETAB-R21 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1714714..1725820
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRX86_RS08140 (LRX86_08135) | - | 1714891..1715214 (+) | 324 | WP_000121847.1 | hypothetical protein | - |
| LRX86_RS08145 (LRX86_08140) | grxD | 1715261..1715602 (-) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| LRX86_RS08150 (LRX86_08145) | - | 1715830..1717038 (+) | 1209 | WP_000129937.1 | aspartate aminotransferase family protein | - |
| LRX86_RS08155 (LRX86_08150) | - | 1717089..1717520 (-) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| LRX86_RS08160 (LRX86_08155) | - | 1717661..1718035 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| LRX86_RS08165 (LRX86_08160) | - | 1718371..1718604 (-) | 234 | WP_000616034.1 | hypothetical protein | - |
| LRX86_RS08170 (LRX86_08165) | - | 1718820..1719179 (+) | 360 | WP_000185571.1 | hypothetical protein | - |
| LRX86_RS08175 (LRX86_08170) | - | 1719280..1719606 (+) | 327 | WP_000955083.1 | hypothetical protein | - |
| LRX86_RS08180 (LRX86_08175) | pilA | 1719714..1720820 (+) | 1107 | WP_001187346.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| LRX86_RS08185 (LRX86_08180) | - | 1721010..1721606 (+) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| LRX86_RS08190 (LRX86_08185) | - | 1721832..1722503 (+) | 672 | WP_000175343.1 | DUF2057 domain-containing protein | - |
| LRX86_RS08195 (LRX86_08190) | - | 1722561..1722860 (-) | 300 | WP_096877444.1 | cyd operon YbgE family protein | - |
| LRX86_RS08200 (LRX86_08195) | cydX | 1722861..1722962 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| LRX86_RS08205 (LRX86_08200) | cydB | 1722976..1724121 (-) | 1146 | WP_000575152.1 | cytochrome d ubiquinol oxidase subunit II | - |
| LRX86_RS08210 (LRX86_08205) | - | 1724118..1725704 (-) | 1587 | WP_000622647.1 | cytochrome ubiquinol oxidase subunit I | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39947.78 Da Isoelectric Point: 4.9872
>NTDB_id=547637 LRX86_RS08180 WP_001187346.1 1719714..1720820(+) (pilA) [Acinetobacter baumannii strain DETAB-R21]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKVEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKVEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=547637 LRX86_RS08180 WP_001187346.1 1719714..1720820(+) (pilA) [Acinetobacter baumannii strain DETAB-R21]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGTTGAAGAAGTTGTCGAGGCTGCACCGT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGGCGAATGAAAGAAGGCTTGAGCAAAACTCGTCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAGTTGGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGATCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGTTGAAGAAGTTGTCGAGGCTGCACCGT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGGCGAATGAAAGAAGGCTTGAGCAAAACTCGTCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAGTTGGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGATCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.025 |
87.228 |
0.454 |