Detailed information
Bioinformatically predicted
Overview
| Name | pilM | Type | Machinery gene |
| Locus tag | LEPTO7376_RS19530 | Genome accession | NC_019683 |
| Coordinates | 4336001..4337104 (+) | Length | 367 a.a. |
| NCBI ID | WP_015135789.1 | Uniprot ID | K9Q3W6 |
| Organism | [Leptolyngbya] sp. PCC 7376 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4331001..4342104
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LEPTO7376_RS26020 (Lepto7376_3908) | - | 4331052..4331776 (+) | 725 | WP_315861540.1 | IS1 family transposase | - |
| LEPTO7376_RS19505 (Lepto7376_3909) | - | 4331906..4332205 (-) | 300 | WP_015135784.1 | hypothetical protein | - |
| LEPTO7376_RS19510 (Lepto7376_3910) | - | 4332511..4333245 (-) | 735 | WP_015135785.1 | ATP-binding cassette domain-containing protein | - |
| LEPTO7376_RS19515 (Lepto7376_3911) | - | 4333246..4333914 (-) | 669 | WP_015135786.1 | RibD family protein | - |
| LEPTO7376_RS19520 (Lepto7376_3912) | - | 4333907..4334356 (-) | 450 | WP_015135787.1 | DUF3531 family protein | - |
| LEPTO7376_RS19525 (Lepto7376_3913) | - | 4334485..4335771 (-) | 1287 | WP_015135788.1 | ABC transporter substrate-binding protein | - |
| LEPTO7376_RS19530 (Lepto7376_3914) | pilM | 4336001..4337104 (+) | 1104 | WP_015135789.1 | type IV pilus assembly protein PilM | Machinery gene |
| LEPTO7376_RS19535 (Lepto7376_3915) | - | 4337108..4337827 (+) | 720 | WP_015135790.1 | PilN domain-containing protein | - |
| LEPTO7376_RS19540 (Lepto7376_3916) | - | 4337881..4338645 (+) | 765 | WP_015135791.1 | hypothetical protein | - |
| LEPTO7376_RS19545 (Lepto7376_3917) | - | 4338819..4341101 (+) | 2283 | WP_041764186.1 | secretin N-terminal domain-containing protein | - |
| LEPTO7376_RS26615 | - | 4341351..4341530 (-) | 180 | WP_160148523.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 367 a.a. Molecular weight: 40516.41 Da Isoelectric Point: 4.1648
>NTDB_id=54731 LEPTO7376_RS19530 WP_015135789.1 4336001..4337104(+) (pilM) [[Leptolyngbya] sp. PCC 7376]
MLDFLKNILKPKNNGIGIEISAERLNIVQLKKQGQIYKLVNCISEEIPEGIFEEGKIVDSPALAELIQDTLAAHNITTKK
VAAAVPMREAIIRLIPIPAELDDAELRDMVLNHEAGLYLPYPREEVDLDYQKLGFFQDEDGIDKVQVLLVATRQEVTDSY
YDTFYQAGLQIDVLEINSFSLIRTIREQLRQFSSQEAVVLVDVEFDCTEIAIVVDGVPQFSRTVPIGTFQLQSALSRAMN
LPASRNIELLQGMTIPNTPVEGVRTGATGINPGMAALLRVLGELADELRRSIDFYLNQSAELEVAQLLLAGPGGGIGQLD
EFFTQRLSIPTLQIDPFDALSIETEDDIPQVQKPSLGTALGLGLREV
MLDFLKNILKPKNNGIGIEISAERLNIVQLKKQGQIYKLVNCISEEIPEGIFEEGKIVDSPALAELIQDTLAAHNITTKK
VAAAVPMREAIIRLIPIPAELDDAELRDMVLNHEAGLYLPYPREEVDLDYQKLGFFQDEDGIDKVQVLLVATRQEVTDSY
YDTFYQAGLQIDVLEINSFSLIRTIREQLRQFSSQEAVVLVDVEFDCTEIAIVVDGVPQFSRTVPIGTFQLQSALSRAMN
LPASRNIELLQGMTIPNTPVEGVRTGATGINPGMAALLRVLGELADELRRSIDFYLNQSAELEVAQLLLAGPGGGIGQLD
EFFTQRLSIPTLQIDPFDALSIETEDDIPQVQKPSLGTALGLGLREV
Nucleotide
Download Length: 1104 bp
>NTDB_id=54731 LEPTO7376_RS19530 WP_015135789.1 4336001..4337104(+) (pilM) [[Leptolyngbya] sp. PCC 7376]
ATGTTAGATTTTCTCAAAAATATCCTAAAGCCCAAGAACAACGGTATAGGTATAGAAATTTCTGCCGAGCGGCTCAATAT
TGTCCAATTAAAAAAGCAAGGACAGATTTACAAACTCGTCAATTGCATCAGCGAAGAAATCCCAGAAGGAATTTTCGAAG
AAGGCAAAATTGTCGATTCTCCTGCCCTTGCTGAATTAATTCAAGACACGCTAGCCGCTCACAACATCACGACTAAAAAG
GTTGCAGCCGCAGTCCCCATGCGCGAAGCAATTATTCGACTTATCCCCATTCCTGCCGAGCTTGATGACGCAGAATTGCG
AGATATGGTGCTCAACCACGAAGCTGGTTTGTATTTGCCCTATCCCCGCGAGGAAGTTGATCTCGATTACCAAAAACTAG
GCTTTTTCCAAGACGAAGATGGCATTGATAAAGTGCAAGTGCTTCTCGTCGCGACTCGTCAGGAAGTCACGGATTCTTAC
TACGACACCTTTTACCAAGCAGGCCTCCAGATTGATGTCTTAGAGATTAATAGCTTTTCTCTAATTCGCACCATCCGCGA
ACAACTACGTCAGTTTAGTTCCCAAGAGGCGGTTGTCCTCGTTGATGTGGAATTTGACTGCACAGAAATTGCGATTGTTG
TTGATGGCGTCCCGCAATTTTCCCGAACTGTTCCGATTGGTACATTCCAGCTCCAAAGCGCTTTGTCGCGAGCGATGAAT
TTGCCAGCCTCTCGCAATATTGAATTGCTGCAAGGGATGACAATTCCCAACACTCCTGTGGAAGGTGTTCGTACTGGTGC
TACTGGTATCAATCCCGGTATGGCAGCTTTACTGAGAGTTTTAGGTGAATTGGCTGATGAACTCCGCCGTTCCATTGACT
TTTATCTCAATCAGAGTGCAGAGCTAGAAGTAGCGCAACTACTGTTGGCTGGTCCTGGTGGTGGTATCGGTCAGCTCGAT
GAATTCTTTACCCAGCGATTAAGTATTCCGACCCTACAGATTGATCCGTTTGATGCTCTATCCATTGAAACGGAAGATGA
TATCCCACAGGTTCAGAAACCATCTTTGGGAACAGCACTCGGACTCGGATTAAGGGAGGTTTAG
ATGTTAGATTTTCTCAAAAATATCCTAAAGCCCAAGAACAACGGTATAGGTATAGAAATTTCTGCCGAGCGGCTCAATAT
TGTCCAATTAAAAAAGCAAGGACAGATTTACAAACTCGTCAATTGCATCAGCGAAGAAATCCCAGAAGGAATTTTCGAAG
AAGGCAAAATTGTCGATTCTCCTGCCCTTGCTGAATTAATTCAAGACACGCTAGCCGCTCACAACATCACGACTAAAAAG
GTTGCAGCCGCAGTCCCCATGCGCGAAGCAATTATTCGACTTATCCCCATTCCTGCCGAGCTTGATGACGCAGAATTGCG
AGATATGGTGCTCAACCACGAAGCTGGTTTGTATTTGCCCTATCCCCGCGAGGAAGTTGATCTCGATTACCAAAAACTAG
GCTTTTTCCAAGACGAAGATGGCATTGATAAAGTGCAAGTGCTTCTCGTCGCGACTCGTCAGGAAGTCACGGATTCTTAC
TACGACACCTTTTACCAAGCAGGCCTCCAGATTGATGTCTTAGAGATTAATAGCTTTTCTCTAATTCGCACCATCCGCGA
ACAACTACGTCAGTTTAGTTCCCAAGAGGCGGTTGTCCTCGTTGATGTGGAATTTGACTGCACAGAAATTGCGATTGTTG
TTGATGGCGTCCCGCAATTTTCCCGAACTGTTCCGATTGGTACATTCCAGCTCCAAAGCGCTTTGTCGCGAGCGATGAAT
TTGCCAGCCTCTCGCAATATTGAATTGCTGCAAGGGATGACAATTCCCAACACTCCTGTGGAAGGTGTTCGTACTGGTGC
TACTGGTATCAATCCCGGTATGGCAGCTTTACTGAGAGTTTTAGGTGAATTGGCTGATGAACTCCGCCGTTCCATTGACT
TTTATCTCAATCAGAGTGCAGAGCTAGAAGTAGCGCAACTACTGTTGGCTGGTCCTGGTGGTGGTATCGGTCAGCTCGAT
GAATTCTTTACCCAGCGATTAAGTATTCCGACCCTACAGATTGATCCGTTTGATGCTCTATCCATTGAAACGGAAGATGA
TATCCCACAGGTTCAGAAACCATCTTTGGGAACAGCACTCGGACTCGGATTAAGGGAGGTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilM | Synechocystis sp. PCC 6803 |
71.585 |
99.728 |
0.714 |