Detailed information NTG0547261

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LRM32_RS00890
• Genome accession: NZ_CP088131
• Coordinates: 186952..187935 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 81
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 181952..192935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRM32_RS00870 (LRM32_00870)	dppA	183095..184702 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
LRM32_RS24340	-	184736..184846 (-)	111	Protein_172	hypothetical protein	-
LRM32_RS00880 (LRM32_00880)	dppB	185010..186029 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LRM32_RS00885 (LRM32_00885)	dppC	186039..186941 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LRM32_RS00890 (LRM32_00890)	amiE	186952..187935 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LRM32_RS00895 (LRM32_00895)	dppF	187932..188936 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LRM32_RS00900 (LRM32_00900)	yhjV	188966..190237 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LRM32_RS00905 (LRM32_00905)	-	190713..190820 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LRM32_RS00910 (LRM32_00910)	-	191196..191303 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LRM32_RS00915 (LRM32_00915)	ldrD	191679..191786 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LRM32_RS00920 (LRM32_00920)	ldrD	192162..192269 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=547261 LRM32_RS00890 WP_001196486.1 186952..187935(+) (amiE) [Escherichia coli strain 81]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=547261 LRM32_RS00890 WP_001196486.1 186952..187935(+) (amiE) [Escherichia coli strain 81]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404