Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   J1899_RS04810 Genome accession   NZ_CP071709
Coordinates   997763..998566 (+) Length   267 a.a.
NCBI ID   WP_214477900.1    Uniprot ID   -
Organism   Cytobacillus gottheilii strain 1839     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 992763..1003566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1899_RS04790 (J1899_04790) - 993990..995834 (+) 1845 WP_214477898.1 ABC transporter ATP-binding protein -
  J1899_RS04795 (J1899_04795) - 995902..996084 (-) 183 WP_066449234.1 YfhD family protein -
  J1899_RS04800 (J1899_04800) - 996537..996668 (-) 132 WP_082851741.1 YfhE family protein -
  J1899_RS04805 (J1899_04805) - 996742..997644 (-) 903 WP_214477899.1 TIGR01777 family oxidoreductase -
  J1899_RS04810 (J1899_04810) recX 997763..998566 (+) 804 WP_214477900.1 recombination regulator RecX Regulator
  J1899_RS04815 (J1899_04815) - 998678..999007 (+) 330 WP_214477901.1 YfhH family protein -
  J1899_RS04820 (J1899_04820) - 999180..999350 (-) 171 WP_066449225.1 small, acid-soluble spore protein K -
  J1899_RS04825 (J1899_04825) - 999454..999723 (+) 270 WP_214477902.1 YfhJ family protein -
  J1899_RS04830 (J1899_04830) - 999756..1000736 (-) 981 WP_214477903.1 metal-dependent hydrolase -
  J1899_RS04835 (J1899_04835) mutY 1001074..1002177 (+) 1104 WP_066449216.1 A/G-specific adenine glycosylase -
  J1899_RS04840 (J1899_04840) - 1002341..1002565 (-) 225 WP_066449213.1 hypothetical protein -
  J1899_RS04845 (J1899_04845) fabL 1002688..1003437 (+) 750 WP_214477904.1 enoyl-[acyl-carrier-protein] reductase FabL -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 31222.44 Da        Isoelectric Point: 5.8163

>NTDB_id=547181 J1899_RS04810 WP_214477900.1 997763..998566(+) (recX) [Cytobacillus gottheilii strain 1839]
MPVITKISIQKKNKDRYNIFTDDGSGEAYSFSVDEDVLIKHGLKKGMELDEFLLSEIGYHDDVRKSYNDAIGYLSRRMRS
EYEVRTFLKGKEVDEAIIQETIHKLYDYSFLNDEEFALAFVRTQMNTTDKGRGLIRMELKEKGISDELIEKALEQFSYEH
ELETAIKLCEKNLRKNTKESTRIAKQKLEQVLSRKGFYSDIIKEAISASAPEKEEDEELAALRHQAEKASRKYRALPEFE
YRQKMKQALARKGFSFDLIDKVLREEE

Nucleotide


Download         Length: 804 bp        

>NTDB_id=547181 J1899_RS04810 WP_214477900.1 997763..998566(+) (recX) [Cytobacillus gottheilii strain 1839]
ATGCCGGTGATTACAAAAATTTCAATCCAAAAGAAAAATAAGGACCGTTATAATATTTTTACCGATGATGGAAGCGGGGA
AGCGTATTCCTTCAGTGTGGATGAAGATGTACTCATTAAGCATGGACTTAAAAAAGGTATGGAGCTTGATGAATTTCTAC
TATCTGAAATTGGCTACCATGATGATGTCCGCAAGTCTTATAATGATGCGATTGGCTATCTTTCAAGGCGGATGCGTTCT
GAGTATGAAGTAAGGACGTTTTTAAAAGGAAAAGAAGTGGATGAAGCCATTATCCAGGAAACCATTCACAAATTATATGA
TTACAGCTTTTTAAACGATGAAGAATTTGCTCTTGCATTTGTACGCACACAGATGAATACGACGGATAAAGGCAGAGGCC
TGATTAGAATGGAGCTAAAGGAAAAAGGAATCAGTGATGAGCTGATAGAAAAGGCACTAGAGCAATTCAGCTATGAACAT
GAGCTAGAAACAGCGATTAAATTATGTGAAAAAAACTTGAGAAAAAACACGAAGGAGTCCACCAGGATTGCCAAGCAAAA
GCTAGAGCAGGTACTAAGCAGAAAAGGATTTTACTCTGACATCATCAAAGAAGCTATTTCTGCATCTGCACCGGAAAAAG
AAGAAGACGAAGAACTGGCTGCATTGCGGCATCAAGCCGAAAAGGCAAGCCGAAAATACAGAGCGCTTCCTGAATTTGAG
TATCGCCAGAAAATGAAACAGGCATTAGCACGCAAAGGATTTTCGTTTGATTTAATTGATAAGGTGCTGAGGGAGGAAGA
GTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(202-265)

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

50.562

100

0.506