Detailed information NTG0547095

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J3K87_RS09280
• Genome accession: NZ_CP071698
• Coordinates: 1984768..1985922 (+)
• Length: 384 a.a.
• NCBI ID: WP_237593391.1
• Uniprot ID: -
• Organism: Actinobacillus pleuropneumoniae strain SC1810
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1979768..1990922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3K87_RS09260 (J3K87_09245)	-	1980041..1981390 (+)	1350	WP_252590427.1	Slam-dependent surface lipoprotein	-
J3K87_RS09265 (J3K87_09250)	-	1981693..1982943 (+)	1251	WP_080517107.1	porin family protein	-
J3K87_RS09270 (J3K87_09255)	rfaD	1983004..1983930 (-)	927	WP_005599195.1	ADP-glyceromanno-heptose 6-epimerase	-
J3K87_RS09275 (J3K87_09260)	def	1984070..1984582 (-)	513	WP_005599196.1	peptide deformylase	-
J3K87_RS09280 (J3K87_09265)	dprA	1984768..1985922 (+)	1155	WP_237593391.1	DNA-processing protein DprA	Machinery gene
J3K87_RS09285 (J3K87_09270)	-	1985966..1987972 (-)	2007	WP_043992102.1	oligopeptide transporter, OPT family	-
J3K87_RS09290 (J3K87_09275)	-	1988194..1989549 (-)	1356	WP_005602524.1	PTS ascorbate transporter subunit IIC	-
J3K87_RS09295 (J3K87_09280)	-	1989558..1989830 (-)	273	WP_252590430.1	PTS sugar transporter subunit IIB	-
J3K87_RS09300 (J3K87_09285)	secE	1990133..1990546 (+)	414	WP_005599209.1	preprotein translocase subunit SecE	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 42859.15 Da
• Isoelectric Point: 5.4205

>NTDB_id=547095 J3K87_RS09280 WP_237593391.1 1984768..1985922(+) (dprA) [Actinobacillus pleuropneumoniae strain SC1810]
MSQADLLKLLQIPQLGAQRIARLLSEVDFAQFCQYDKRQLQQIGWNEKQIQRWFNPEMRWIDNALTWAERPNQHLLSLFD
EEYPFLLRQISIAPPVLFVRGSLSSLSLPQIAIVGSRDFSAYGEYWAGYFSEQLVKHHLAVTSGLAIGIDGFCHQRAVAE
QGITIAVLGSGLDQVYPARHKKLAEQIVESGGALVSEFFPNQPPLAENFPRRNRIISGLSLGTLVVEATLNSGSLITARY
ALEQGREVFALPNSVQNPYAQGCHKLIKEGAVLTETIEDILQAIQYQLPDQPWQQALFEPPQAVENAQFFTKADVPNKVN
HLAKKLLELTACQQQIVAHISLEPISIDDLAKATSLEVETLLVELLGLELLSVIKQVSGGYVRQ

Nucleotide

• Length: 1155 bp

>NTDB_id=547095 J3K87_RS09280 WP_237593391.1 1984768..1985922(+) (dprA) [Actinobacillus pleuropneumoniae strain SC1810]
ATGTCTCAGGCTGATTTACTGAAATTATTGCAGATTCCGCAACTGGGGGCGCAGCGCATTGCTCGTCTGTTATCCGAAGT
GGATTTTGCCCAATTTTGCCAATATGACAAACGCCAATTACAACAAATTGGTTGGAACGAGAAACAGATTCAACGCTGGT
TCAATCCGGAAATGCGTTGGATTGATAATGCTCTCACGTGGGCGGAGCGGCCGAATCAACACTTATTGAGCTTATTTGAT
GAGGAATATCCGTTTTTATTACGGCAAATCAGTATCGCACCGCCGGTGTTATTTGTGCGAGGTTCGCTAAGTAGTTTGAG
CTTACCGCAAATTGCGATTGTCGGTAGTCGAGACTTTTCCGCCTACGGAGAATACTGGGCGGGCTATTTTAGCGAGCAAT
TGGTTAAACATCATTTGGCGGTTACTAGCGGACTTGCAATCGGCATAGACGGTTTTTGCCATCAGCGAGCGGTAGCGGAA
CAGGGTATTACGATTGCTGTGTTGGGCAGCGGTTTAGATCAAGTCTATCCGGCAAGGCACAAAAAATTGGCGGAGCAAAT
TGTCGAAAGCGGCGGGGCGTTAGTGTCGGAATTTTTTCCGAATCAACCGCCGCTTGCCGAAAATTTCCCTCGTCGTAATC
GCATTATCAGCGGTTTGTCACTCGGTACGTTAGTGGTGGAAGCCACATTAAATAGCGGTTCGCTGATTACCGCTCGTTAT
GCGTTGGAACAAGGGCGAGAAGTGTTTGCATTACCGAATTCGGTACAAAATCCGTATGCACAAGGCTGTCATAAACTGAT
CAAAGAAGGGGCGGTTTTAACCGAAACGATAGAGGATATTTTACAGGCAATTCAATATCAACTGCCGGATCAGCCTTGGC
AACAGGCTCTGTTTGAACCGCCACAAGCGGTTGAAAACGCACAATTTTTTACAAAAGCAGATGTGCCGAATAAGGTCAAT
CATCTTGCAAAAAAATTGCTGGAATTGACCGCTTGTCAGCAACAAATTGTGGCGCATATTAGTCTTGAACCGATTTCGAT
TGACGATTTGGCTAAGGCGACTTCATTGGAGGTGGAAACACTGTTAGTCGAGTTACTGGGTTTGGAATTATTAAGTGTGA
TTAAGCAGGTAAGCGGCGGTTATGTCAGACAATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-274)

• DprA winged helix domain (DprA_WH) (328-380)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	74.67	98.698	0.737
dprA	Vibrio campbellii strain DS40M4	46.719	99.219	0.464
dprA	Haemophilus influenzae Rd KW20	49.568	90.365	0.448
dprA	Vibrio cholerae strain A1552	41.085	100	0.414
dprA	Legionella pneumophila strain ERS1305867	37.598	99.74	0.375