Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   J1N58_RS09780 Genome accession   NZ_CP071697
Coordinates   2049362..2050096 (-) Length   244 a.a.
NCBI ID   WP_002942356.1    Uniprot ID   G7SIC8
Organism   Streptococcus suis strain 1112S     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2044362..2055096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1N58_RS09750 (J1N58_09750) - 2044577..2044873 (-) 297 WP_002942375.1 YlxR family protein -
  J1N58_RS09755 (J1N58_09755) nusA 2044890..2046044 (-) 1155 WP_024377936.1 transcription termination factor NusA -
  J1N58_RS09760 (J1N58_09760) rimP 2046118..2046588 (-) 471 WP_002942369.1 ribosome maturation factor RimP -
  J1N58_RS09765 (J1N58_09765) trmB 2046846..2047484 (-) 639 WP_099831138.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  J1N58_RS09770 (J1N58_09770) - 2047481..2048275 (-) 795 WP_002942360.1 phosphotransferase family protein -
  J1N58_RS09775 (J1N58_09775) - 2048325..2049365 (-) 1041 WP_207560318.1 ABC transporter permease -
  J1N58_RS09780 (J1N58_09780) pptA 2049362..2050096 (-) 735 WP_002942356.1 ABC transporter ATP-binding protein Regulator
  J1N58_RS09785 (J1N58_09785) - 2050159..2050572 (+) 414 WP_099780203.1 HIT family protein -
  J1N58_RS09790 (J1N58_09790) - 2050574..2050903 (+) 330 WP_099780204.1 chemotaxis protein -
  J1N58_RS09795 (J1N58_09795) - 2051377..2052570 (-) 1194 WP_099780205.1 LCP family protein -
  J1N58_RS09800 (J1N58_09800) - 2052567..2053094 (-) 528 WP_099780206.1 GNAT family N-acetyltransferase -
  J1N58_RS09805 (J1N58_09805) tsaE 2053087..2053527 (-) 441 WP_024376437.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26832.10 Da        Isoelectric Point: 4.3606

>NTDB_id=547065 J1N58_RS09780 WP_002942356.1 2049362..2050096(-) (pptA) [Streptococcus suis strain 1112S]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=547065 J1N58_RS09780 WP_002942356.1 2049362..2050096(-) (pptA) [Streptococcus suis strain 1112S]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAAGGACAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAACTACCGGAAGAAGATTGGTTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCATGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGATTTAATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGCACTTCCATTCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTTCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SIC8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721