Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BKM84_RS05230 | Genome accession | NZ_CP071592 |
| Coordinates | 1013293..1013595 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain GB19 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1008293..1018595
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKM84_RS05205 (BKM84_05205) | rpsR | 1008655..1008915 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| BKM84_RS05210 (BKM84_05210) | lon | 1008976..1011351 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| BKM84_RS05215 (BKM84_05215) | - | 1011368..1012015 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| BKM84_RS05220 (BKM84_05220) | fliW | 1012176..1012565 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| BKM84_RS05225 (BKM84_05225) | proC | 1012565..1013296 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BKM84_RS05230 (BKM84_05230) | ctsT | 1013293..1013595 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| BKM84_RS05235 (BKM84_05235) | - | 1013592..1014254 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| BKM84_RS05240 (BKM84_05240) | - | 1014251..1014703 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| BKM84_RS05245 (BKM84_05245) | hemD | 1014700..1015329 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| BKM84_RS05250 (BKM84_05250) | thiE | 1015307..1015939 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| BKM84_RS05255 (BKM84_05255) | thiD | 1015929..1016741 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BKM84_RS05260 (BKM84_05260) | - | 1016738..1017424 (-) | 687 | WP_002894310.1 | endonuclease III domain-containing protein | - |
| BKM84_RS05265 (BKM84_05265) | - | 1017421..1018182 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=546764 BKM84_RS05230 WP_002853046.1 1013293..1013595(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain GB19]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=546764 BKM84_RS05230 WP_002853046.1 1013293..1013595(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain GB19]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |