Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | J3Q14_RS05195 | Genome accession | NZ_CP071587 |
| Coordinates | 1017029..1017331 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain RM1477 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1012029..1022331
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3Q14_RS05170 (J3Q14_05170) | rpsR | 1012391..1012651 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| J3Q14_RS05175 (J3Q14_05175) | lon | 1012712..1015087 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| J3Q14_RS05180 (J3Q14_05180) | - | 1015104..1015751 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| J3Q14_RS05185 (J3Q14_05185) | fliW | 1015912..1016301 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| J3Q14_RS05190 (J3Q14_05190) | proC | 1016301..1017032 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| J3Q14_RS05195 (J3Q14_05195) | ctsT | 1017029..1017331 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| J3Q14_RS05200 (J3Q14_05200) | - | 1017328..1017990 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| J3Q14_RS05205 (J3Q14_05205) | - | 1017987..1018439 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| J3Q14_RS05210 (J3Q14_05210) | hemD | 1018436..1019065 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| J3Q14_RS05215 (J3Q14_05215) | thiE | 1019043..1019675 (-) | 633 | WP_002911210.1 | thiamine phosphate synthase | - |
| J3Q14_RS05220 (J3Q14_05220) | thiD | 1019665..1020477 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J3Q14_RS05225 (J3Q14_05225) | - | 1020474..1021160 (-) | 687 | WP_002856040.1 | nuclease | - |
| J3Q14_RS05230 (J3Q14_05230) | - | 1021157..1021918 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=546695 J3Q14_RS05195 WP_002855822.1 1017029..1017331(+) (ctsT) [Campylobacter jejuni strain RM1477]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=546695 J3Q14_RS05195 WP_002855822.1 1017029..1017331(+) (ctsT) [Campylobacter jejuni strain RM1477]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |