Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   BKM86_RS03320 Genome accession   NZ_CP071585
Coordinates   631360..631797 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni subsp. jejuni strain GB26     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 626360..636797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM86_RS03300 (BKM86_03300) kdpD 626852..628672 (+) 1821 WP_052806233.1 DUF4118 domain-containing protein -
  BKM86_RS03305 (BKM86_03305) uvrB 628774..630747 (-) 1974 WP_002855027.1 excinuclease ABC subunit UvrB -
  BKM86_RS03310 (BKM86_03310) - 630901..631131 (+) 231 WP_002852327.1 hypothetical protein -
  BKM86_RS03315 (BKM86_03315) - 631121..631363 (+) 243 WP_002854947.1 hypothetical protein -
  BKM86_RS03320 (BKM86_03320) Cj0683 631360..631797 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  BKM86_RS03325 (BKM86_03325) priA 631779..633632 (+) 1854 WP_002872608.1 primosomal protein N' -
  BKM86_RS03330 (BKM86_03330) cipA 633642..635036 (-) 1395 WP_002872609.1 DUF2972 domain-containing protein -
  BKM86_RS03335 (BKM86_03335) ispG 635182..636255 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=546636 BKM86_RS03320 WP_002852324.1 631360..631797(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain GB26]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=546636 BKM86_RS03320 WP_002852324.1 631360..631797(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain GB26]
ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1