Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | J3Q21_RS05165 | Genome accession | NZ_CP071584 |
| Coordinates | 1015585..1015887 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain R73 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1010585..1020887
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3Q21_RS05140 (J3Q21_05140) | rpsR | 1010947..1011207 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| J3Q21_RS05145 (J3Q21_05145) | lon | 1011268..1013643 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| J3Q21_RS05150 (J3Q21_05150) | - | 1013660..1014307 (-) | 648 | WP_052802621.1 | outer membrane protein assembly factor BamD | - |
| J3Q21_RS05155 (J3Q21_05155) | fliW | 1014468..1014857 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| J3Q21_RS05160 (J3Q21_05160) | proC | 1014857..1015588 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| J3Q21_RS05165 (J3Q21_05165) | ctsT | 1015585..1015887 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| J3Q21_RS05170 (J3Q21_05170) | - | 1015884..1016546 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| J3Q21_RS05175 (J3Q21_05175) | - | 1016543..1016995 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| J3Q21_RS05180 (J3Q21_05180) | hemD | 1016992..1017621 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| J3Q21_RS05185 (J3Q21_05185) | thiE | 1017599..1018231 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| J3Q21_RS05190 (J3Q21_05190) | thiD | 1018221..1019033 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J3Q21_RS05195 (J3Q21_05195) | - | 1019030..1019716 (-) | 687 | WP_052802622.1 | endonuclease III domain-containing protein | - |
| J3Q21_RS05200 (J3Q21_05200) | - | 1019713..1020474 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=546612 J3Q21_RS05165 WP_002855822.1 1015585..1015887(+) (ctsT) [Campylobacter jejuni strain R73]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=546612 J3Q21_RS05165 WP_002855822.1 1015585..1015887(+) (ctsT) [Campylobacter jejuni strain R73]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |