Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | J3Q12_RS05130 | Genome accession | NZ_CP071582 |
| Coordinates | 1008535..1008837 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain GB28 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1003535..1013837
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3Q12_RS05105 (J3Q12_05105) | rpsR | 1003897..1004157 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| J3Q12_RS05110 (J3Q12_05110) | lon | 1004218..1006593 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| J3Q12_RS05115 (J3Q12_05115) | - | 1006610..1007257 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| J3Q12_RS05120 (J3Q12_05120) | fliW | 1007418..1007807 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| J3Q12_RS05125 (J3Q12_05125) | proC | 1007807..1008538 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| J3Q12_RS05130 (J3Q12_05130) | ctsT | 1008535..1008837 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| J3Q12_RS05135 (J3Q12_05135) | - | 1008834..1009496 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| J3Q12_RS05140 (J3Q12_05140) | - | 1009493..1009945 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| J3Q12_RS05145 (J3Q12_05145) | hemD | 1009942..1010571 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| J3Q12_RS05150 (J3Q12_05150) | thiE | 1010549..1011181 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| J3Q12_RS05155 (J3Q12_05155) | thiD | 1011171..1011983 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J3Q12_RS05160 (J3Q12_05160) | - | 1011980..1012666 (-) | 687 | WP_052802622.1 | endonuclease III domain-containing protein | - |
| J3Q12_RS05165 (J3Q12_05165) | - | 1012663..1013424 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=546558 J3Q12_RS05130 WP_002855822.1 1008535..1008837(+) (ctsT) [Campylobacter jejuni strain GB28]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=546558 J3Q12_RS05130 WP_002855822.1 1008535..1008837(+) (ctsT) [Campylobacter jejuni strain GB28]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |