Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | J3Q20_RS05220 | Genome accession | NZ_CP071578 |
| Coordinates | 1021293..1021595 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain R72 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1016293..1026595
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3Q20_RS05195 (J3Q20_05195) | rpsR | 1016655..1016915 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| J3Q20_RS05200 (J3Q20_05200) | lon | 1016976..1019351 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| J3Q20_RS05205 (J3Q20_05205) | - | 1019368..1020015 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| J3Q20_RS05210 (J3Q20_05210) | fliW | 1020176..1020565 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| J3Q20_RS05215 (J3Q20_05215) | proC | 1020565..1021296 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| J3Q20_RS05220 (J3Q20_05220) | ctsT | 1021293..1021595 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| J3Q20_RS05225 (J3Q20_05225) | - | 1021592..1022254 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| J3Q20_RS05230 (J3Q20_05230) | - | 1022251..1022703 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| J3Q20_RS05235 (J3Q20_05235) | hemD | 1022700..1023329 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| J3Q20_RS05240 (J3Q20_05240) | thiE | 1023307..1023939 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| J3Q20_RS05245 (J3Q20_05245) | thiD | 1023929..1024741 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J3Q20_RS05250 (J3Q20_05250) | - | 1024738..1025424 (-) | 687 | WP_057036290.1 | endonuclease III domain-containing protein | - |
| J3Q20_RS05255 (J3Q20_05255) | - | 1025421..1026182 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=546449 J3Q20_RS05220 WP_002855822.1 1021293..1021595(+) (ctsT) [Campylobacter jejuni strain R72]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=546449 J3Q20_RS05220 WP_002855822.1 1021293..1021595(+) (ctsT) [Campylobacter jejuni strain R72]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |