Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | J3Q16_RS05220 | Genome accession | NZ_CP071575 |
| Coordinates | 1021326..1021628 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain RM3147 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1016326..1026628
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3Q16_RS05195 (J3Q16_05195) | rpsR | 1016688..1016948 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| J3Q16_RS05200 (J3Q16_05200) | lon | 1017009..1019384 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| J3Q16_RS05205 (J3Q16_05205) | - | 1019401..1020048 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| J3Q16_RS05210 (J3Q16_05210) | fliW | 1020209..1020598 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| J3Q16_RS05215 (J3Q16_05215) | proC | 1020598..1021329 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| J3Q16_RS05220 (J3Q16_05220) | ctsT | 1021326..1021628 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| J3Q16_RS05225 (J3Q16_05225) | - | 1021625..1022287 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| J3Q16_RS05230 (J3Q16_05230) | - | 1022284..1022736 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| J3Q16_RS05235 (J3Q16_05235) | hemD | 1022733..1023362 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| J3Q16_RS05240 (J3Q16_05240) | thiE | 1023340..1023972 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| J3Q16_RS05245 (J3Q16_05245) | thiD | 1023962..1024774 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J3Q16_RS05250 (J3Q16_05250) | - | 1024771..1025457 (-) | 687 | WP_057036290.1 | endonuclease III domain-containing protein | - |
| J3Q16_RS05255 (J3Q16_05255) | - | 1025454..1026215 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=546368 J3Q16_RS05220 WP_002855822.1 1021326..1021628(+) (ctsT) [Campylobacter jejuni strain RM3147]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=546368 J3Q16_RS05220 WP_002855822.1 1021326..1021628(+) (ctsT) [Campylobacter jejuni strain RM3147]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |