Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | J3Q15_RS05480 | Genome accession | NZ_CP071574 |
| Coordinates | 1058702..1059004 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain RM1510 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1053702..1064004
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3Q15_RS05455 (J3Q15_05455) | rpsR | 1054064..1054324 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| J3Q15_RS05460 (J3Q15_05460) | lon | 1054385..1056760 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| J3Q15_RS05465 (J3Q15_05465) | - | 1056777..1057424 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| J3Q15_RS05470 (J3Q15_05470) | fliW | 1057585..1057974 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| J3Q15_RS05475 (J3Q15_05475) | proC | 1057974..1058705 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| J3Q15_RS05480 (J3Q15_05480) | ctsT | 1058702..1059004 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| J3Q15_RS05485 (J3Q15_05485) | - | 1059001..1059663 (+) | 663 | WP_002856624.1 | hypothetical protein | - |
| J3Q15_RS05490 (J3Q15_05490) | - | 1059660..1060112 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| J3Q15_RS05495 (J3Q15_05495) | hemD | 1060109..1060738 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| J3Q15_RS05500 (J3Q15_05500) | thiE | 1060716..1061348 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| J3Q15_RS05505 (J3Q15_05505) | thiD | 1061338..1062150 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| J3Q15_RS05510 (J3Q15_05510) | - | 1062147..1062833 (-) | 687 | WP_002856040.1 | nuclease | - |
| J3Q15_RS05515 (J3Q15_05515) | - | 1062830..1063591 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=546341 J3Q15_RS05480 WP_002855822.1 1058702..1059004(+) (ctsT) [Campylobacter jejuni strain RM1510]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=546341 J3Q15_RS05480 WP_002855822.1 1058702..1059004(+) (ctsT) [Campylobacter jejuni strain RM1510]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |