Detailed information NTG0545995

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: J2N86_RS03140
• Genome accession: NZ_CP071527
• Coordinates: 708026..709078 (+)
• Length: 350 a.a.
• NCBI ID: WP_252580946.1
• Uniprot ID: -
• Organism: Legionella lytica strain PCM 2298
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 703026..714078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J2N86_RS03120 (J2N86_03120)	dotD	703844..704335 (-)	492	WP_252580939.1	type IVB secretion system lipoprotein DotD	-
J2N86_RS03125 (J2N86_03125)	rsmD	704796..705341 (-)	546	WP_252580941.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
J2N86_RS03130 (J2N86_03130)	-	705338..706642 (-)	1305	WP_252580943.1	pitrilysin family protein	-
J2N86_RS03135 (J2N86_03135)	-	706639..707964 (-)	1326	WP_252580945.1	pitrilysin family protein	-
J2N86_RS03140 (J2N86_03140)	pilA	708026..709078 (+)	1053	WP_252580946.1	signal recognition particle-docking protein FtsY	Machinery gene
J2N86_RS03145 (J2N86_03145)	ftsE	709065..709715 (+)	651	WP_252580948.1	cell division ATP-binding protein FtsE	-
J2N86_RS03150 (J2N86_03150)	ftsX	709709..710638 (+)	930	WP_252580949.1	permease-like cell division protein FtsX	-
J2N86_RS03155 (J2N86_03155)	rpoH	710661..711515 (+)	855	WP_252580951.1	RNA polymerase sigma factor RpoH	-
J2N86_RS03160 (J2N86_03160)	-	711598..712461 (-)	864	WP_252580953.1	alpha/beta hydrolase	-
J2N86_RS03165 (J2N86_03165)	-	712667..713380 (+)	714	WP_252580954.1	dienelactone hydrolase family protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38240.86 Da
• Isoelectric Point: 6.2468

>NTDB_id=545995 J2N86_RS03140 WP_252580946.1 708026..709078(+) (pilA) [Legionella lytica strain PCM 2298]
MIKWFKRGQSEAPSKSNEQQEIEESISEVAPRPVEPEPEVTKEGIFARFRKGLSKTRHQLGDGIGRLLLGKKEISQELLD
ELETVLITADLGINTTQKVLKQITEGLERKQLANGEAVYDALKEHLQSILTQNDTPLTLETGDHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNDIPVIAQHTGADSASVVFDALQAAKARKMDVLIADTAGRL
HTQGNLMDELKKVKRVLQKLCPEAPHETMLILDASIGQNALVQARQFHEAVNLTGITMTKLDGTAKGGILFAIASELGIP
FRYIGIGEGIEDLRPFGAEQFVGALFHDHI

Nucleotide

• Length: 1053 bp

>NTDB_id=545995 J2N86_RS03140 WP_252580946.1 708026..709078(+) (pilA) [Legionella lytica strain PCM 2298]
ATGATTAAATGGTTTAAACGAGGCCAAAGTGAAGCTCCGTCCAAGAGCAATGAGCAGCAGGAAATCGAAGAGTCTATTTC
TGAGGTGGCTCCACGTCCTGTAGAACCGGAACCCGAAGTCACCAAAGAAGGTATTTTTGCTCGTTTTCGCAAGGGCTTAA
GTAAGACTCGTCACCAATTAGGTGATGGTATTGGACGGCTTCTGTTAGGTAAAAAAGAGATCAGCCAAGAGCTGTTGGAT
GAGTTAGAAACTGTGCTCATTACCGCAGATCTTGGGATTAATACGACGCAGAAAGTATTAAAACAAATCACCGAGGGCTT
AGAGCGTAAGCAATTAGCTAATGGCGAGGCCGTTTATGATGCACTTAAAGAGCATTTACAATCTATTTTAACTCAAAACG
ATACCCCTCTTACTTTAGAGACTGGCGATCATTCGCCTTTTGTGATTTTAATGGTGGGTGTCAATGGCGCTGGAAAAACC
ACCACAATTGGTAAATTAGCGAAACAGTTTCAACAACAAGGAAAAAAGGTCATGTTGGCTGCAGGCGATACCTTTAGAGC
CGCAGCTGTAGAGCAATTACAAGTTTGGGGTGAGCGAAATGATATTCCTGTTATTGCCCAGCATACTGGCGCTGATAGTG
CTTCAGTAGTTTTTGATGCGTTGCAAGCAGCAAAAGCACGTAAGATGGACGTACTCATTGCGGATACTGCCGGACGTTTG
CATACTCAAGGCAATCTGATGGATGAGTTGAAAAAAGTAAAACGAGTCTTGCAAAAACTGTGTCCTGAAGCACCCCATGA
AACGATGTTGATCTTGGATGCAAGCATAGGTCAGAATGCATTAGTGCAGGCACGGCAATTCCATGAAGCAGTAAATTTAA
CGGGCATTACGATGACCAAGTTGGATGGAACTGCTAAAGGCGGAATCTTGTTTGCAATTGCGAGTGAGTTGGGAATACCC
TTTCGTTATATAGGGATTGGTGAAGGGATAGAAGACTTACGTCCCTTTGGTGCTGAACAATTTGTTGGTGCATTGTTTCA
TGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (146-346)

• SRP54-type protein, helical bundle domain (SRP54_N) (60-126)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.404	100	0.523