Detailed information NTG0545973

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LOZ87_RS08180
• Genome accession: NZ_CP087391
• Coordinates: 1606517..1607506 (+)
• Length: 329 a.a.
• NCBI ID: WP_003154301.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain ZF57
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1601517..1612506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOZ87_RS08165 (LOZ87_08165)	acpP	1601714..1601947 (+)	234	WP_003154310.1	acyl carrier protein	-
LOZ87_RS08170 (LOZ87_08170)	rncS	1602086..1602835 (+)	750	WP_007409760.1	ribonuclease III	-
LOZ87_RS08175 (LOZ87_08175)	smc	1602937..1606497 (+)	3561	WP_039063090.1	chromosome segregation protein SMC	-
LOZ87_RS08180 (LOZ87_08180)	pilA	1606517..1607506 (+)	990	WP_003154301.1	signal recognition particle-docking protein FtsY	Machinery gene
LOZ87_RS08185 (LOZ87_08185)	-	1607590..1608360 (+)	771	WP_007409762.1	phosphotransferase family protein	-
LOZ87_RS08190 (LOZ87_08190)	-	1608482..1608814 (+)	333	WP_003154299.1	putative DNA-binding protein	-
LOZ87_RS08195 (LOZ87_08195)	ffh	1608828..1610168 (+)	1341	WP_007409763.1	signal recognition particle protein	-
LOZ87_RS08200 (LOZ87_08200)	rpsP	1610274..1610546 (+)	273	WP_003154296.1	30S ribosomal protein S16	-
LOZ87_RS08205 (LOZ87_08205)	-	1610546..1610791 (+)	246	WP_007611392.1	KH domain-containing protein	-
LOZ87_RS08210 (LOZ87_08210)	-	1610882..1611268 (+)	387	WP_003154291.1	YlqD family protein	-
LOZ87_RS08215 (LOZ87_08215)	rimM	1611273..1611797 (+)	525	WP_039063092.1	ribosome maturation factor RimM	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36096.28 Da
• Isoelectric Point: 5.0098

>NTDB_id=545973 LOZ87_RS08180 WP_003154301.1 1606517..1607506(+) (pilA) [Bacillus amyloliquefaciens strain ZF57]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFSNKVNELVSRYRKVDEDFFEELEEVLIGADVGFTTVMELIDELKKEV
KLKNIQDPQEVQSVISEKLVDIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKLKNEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQAAGSDPAAVIYDAVHAAKARGADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQRFDAESYVYGLF
SDLVEKAED

Nucleotide

• Length: 990 bp

>NTDB_id=545973 LOZ87_RS08180 WP_003154301.1 1606517..1607506(+) (pilA) [Bacillus amyloliquefaciens strain ZF57]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACGAAACAGACAGACTCCGTCTCTGAAAAATTTAAAGATGGTCTTGA
AAAAACAAGAAATTCCTTCTCAAATAAAGTGAACGAACTCGTCTCCCGCTACCGGAAAGTCGACGAGGATTTCTTCGAGG
AGCTTGAGGAAGTGCTGATTGGCGCTGACGTAGGTTTTACAACCGTTATGGAGCTGATTGATGAGCTCAAAAAAGAAGTG
AAGCTGAAAAACATCCAGGATCCTCAGGAAGTGCAGTCCGTCATTTCTGAAAAGCTTGTCGACATTTATAACAGCGGCGA
CGAACAGATTTCTGAATTAAATATTCAGGACGGGCGCCTGAACGTTATTCTGCTTGTCGGGGTAAACGGCGTCGGAAAAA
CGACAACGATCGGAAAACTTGCCCATAAGCTGAAGAATGAAGGCAAATCCGTTGTGCTCGCTGCCGGAGACACCTTTAGA
GCCGGGGCGATTGAACAGCTTGAAGTGTGGGGGGAGCGTACAGGCGTGCCTGTCATTAAACAGGCTGCCGGAAGCGACCC
TGCTGCGGTTATTTATGATGCCGTACACGCGGCTAAAGCAAGAGGAGCGGATGTGCTGATTTGTGATACGGCCGGCCGCC
TTCAGAATAAAGTAAACTTAATGAAAGAGCTTGAAAAAGTCAAACGCGTCATCGAACGCGAAGTGCCTGAGGCTCCGCAT
GAGGTTCTCCTTGCGCTGGACGCGACGACAGGCCAAAATGCGATGGCGCAGGCGAAAGAATTCTCCAAAGCGACGAATGT
GACGGGTATCGCGTTAACGAAGCTTGACGGCACCGCAAAAGGCGGTATCGTCTTGGCGATCCGCAATGAGCTTCACATCC
CCGTGAAACTGGTCGGCCTCGGAGAAAAGGTTGACGATCTCCAGCGGTTTGATGCAGAATCTTACGTATACGGTCTCTTT
TCTGATTTAGTTGAAAAAGCCGAGGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (33-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	45.333	91.185	0.413