Detailed information NTG0545932

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: LOZ87_RS02705
• Genome accession: NZ_CP087391
• Coordinates: 515429..516607 (+)
• Length: 392 a.a.
• NCBI ID: WP_039062667.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain ZF57
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 510429..521607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOZ87_RS02685 (LOZ87_02685)	-	511949..512959 (+)	1011	WP_052248582.1	bifunctional lytic transglycosylase/C40 family peptidase	-
LOZ87_RS02690 (LOZ87_02690)	-	512971..513477 (+)	507	WP_039062664.1	hypothetical protein	-
LOZ87_RS02695 (LOZ87_02695)	-	513540..513920 (+)	381	WP_039062665.1	cystatin-like fold lipoprotein	-
LOZ87_RS02700 (LOZ87_02700)	-	514167..514994 (+)	828	WP_039062666.1	hypothetical protein	-
LOZ87_RS02705 (LOZ87_02705)	rapC	515429..516607 (+)	1179	WP_039062667.1	RapH N-terminal domain-containing protein	Regulator
LOZ87_RS02710 (LOZ87_02710)	-	516789..518066 (+)	1278	WP_029974936.1	hypothetical protein	-
LOZ87_RS02715 (LOZ87_02715)	-	518804..519253 (-)	450	WP_039062668.1	hypothetical protein	-
LOZ87_RS02720 (LOZ87_02720)	-	519937..520095 (+)	159	Protein_491	hypothetical protein	-
LOZ87_RS02725 (LOZ87_02725)	-	520167..520637 (-)	471	WP_032866860.1	MauE/DoxX family redox-associated membrane protein	-
LOZ87_RS02730 (LOZ87_02730)	-	520884..521387 (-)	504	WP_004393007.1	RrF2 family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46612.91 Da
• Isoelectric Point: 4.7020

>NTDB_id=545932 LOZ87_RS02705 WP_039062667.1 515429..516607(+) (rapC) [Bacillus amyloliquefaciens strain ZF57]
MQRILLDENRKIPYDLVTQKLNDWYTLIKNDQVEQAEHIRKEVEKELVNMEENQDALLYYQLLEFRHEIMLSYMESKRID
DLNSAYETIKEMEEQGQLTGMLEYYFFFFTGMYEFRRKELTTAISAYRIAETKLSEVEDEIEKAEFFFKVSYVYYYMKQT
YFSMNYASRALKIFQKFDEYAVQTLRCQFIVAGNLIDSLEFERALQQFLNALEIAEYTKIPHLIGMSHMNIGICYEELKD
YNNATIHLGLSIDIFEKSEHSFLTKALFAMAHVYAKKHNFDIAYNYFIKGRSQAENKNDKEYIAKFKILEGLYFSNGEYE
LINEAFSYLADRKMFADMENFATEIGDYFYGEGELELSNKFYRMSIEARRKIKRGEIINEDQPNSIGSNGVE

Nucleotide

• Length: 1179 bp

>NTDB_id=545932 LOZ87_RS02705 WP_039062667.1 515429..516607(+) (rapC) [Bacillus amyloliquefaciens strain ZF57]
TTGCAACGGATTCTCTTGGATGAAAACAGAAAAATTCCGTATGACCTAGTCACTCAAAAATTGAATGATTGGTATACTCT
TATTAAAAATGATCAAGTTGAGCAGGCTGAGCATATAAGAAAAGAAGTGGAAAAAGAATTAGTGAATATGGAAGAAAATC
AAGACGCTTTGTTATACTATCAATTGCTTGAATTCCGACACGAGATAATGTTGAGTTATATGGAATCGAAAAGGATTGAT
GATTTAAATAGTGCGTATGAAACAATAAAAGAAATGGAAGAGCAAGGGCAATTAACGGGTATGCTTGAGTATTACTTTTT
CTTTTTTACAGGTATGTACGAGTTCAGACGTAAAGAATTAACAACGGCAATAAGTGCTTATAGGATTGCTGAAACAAAAC
TTTCTGAAGTGGAAGATGAAATAGAAAAAGCTGAGTTTTTTTTCAAAGTTTCATACGTTTATTATTATATGAAACAGACT
TACTTTTCGATGAATTATGCTAGTCGTGCTTTGAAAATATTTCAGAAGTTCGATGAATACGCTGTTCAAACATTGCGCTG
TCAGTTTATAGTAGCAGGAAATTTGATAGATTCTTTGGAATTTGAAAGAGCGTTGCAACAATTTTTGAATGCATTGGAAA
TTGCAGAGTACACTAAAATTCCTCATCTGATTGGTATGTCTCATATGAACATTGGGATCTGTTATGAAGAGTTAAAGGAT
TATAATAATGCTACTATCCATTTGGGATTGTCGATAGATATTTTTGAAAAATCTGAACATAGTTTTTTGACAAAAGCTTT
ATTTGCTATGGCTCACGTTTATGCCAAAAAACATAATTTTGATATAGCTTATAATTATTTCATTAAAGGACGAAGTCAAG
CTGAGAATAAGAATGATAAAGAATACATTGCAAAATTTAAAATTTTAGAAGGACTTTATTTTTCAAATGGTGAATATGAA
TTAATTAATGAAGCATTTTCTTATCTTGCTGACAGGAAAATGTTTGCTGACATGGAGAATTTTGCAACTGAAATAGGCGA
TTATTTTTACGGAGAAGGGGAATTAGAACTTTCAAACAAATTTTATCGTATGAGTATTGAAGCAAGACGAAAAATCAAAA
GAGGGGAGATTATTAATGAAGATCAGCCGAATTCTATTGGGAGTAATGGTGTTGAGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (11-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.795	97.194	0.367