Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I8J32_RS00570 Genome accession   NZ_CP071518
Coordinates   117520..117915 (-) Length   131 a.a.
NCBI ID   WP_200614120.1    Uniprot ID   A0A975AS80
Organism   Agrilutibacter solisilvae strain R19     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 112520..122915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8J32_RS18005 (I8J32_000545) - 113942..114377 (-) 436 Protein_109 Hpt domain-containing protein -
  I8J32_RS17420 - 114487..116500 (-) 2014 Protein_110 methyl-accepting chemotaxis protein -
  I8J32_RS00560 (I8J32_000560) - 116568..117134 (-) 567 WP_207526705.1 chemotaxis protein CheW -
  I8J32_RS00565 (I8J32_000565) - 117136..117501 (-) 366 WP_207526706.1 PleD family two-component system response regulator -
  I8J32_RS00570 (I8J32_000570) pilG 117520..117915 (-) 396 WP_200614120.1 twitching motility response regulator PilG Regulator
  I8J32_RS00575 (I8J32_000575) gshB 118146..119105 (+) 960 WP_200614121.1 glutathione synthase -
  I8J32_RS00580 (I8J32_000580) - 119218..120111 (+) 894 WP_200614122.1 energy transducer TonB -
  I8J32_RS00585 (I8J32_000585) lepB 120669..121322 (-) 654 WP_200614123.1 signal peptidase I -
  I8J32_RS00590 (I8J32_000590) tsaB 121415..122125 (-) 711 WP_200614125.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  I8J32_RS00595 (I8J32_000595) - 122151..122549 (-) 399 WP_200614127.1 VOC family protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14649.88 Da        Isoelectric Point: 6.7129

>NTDB_id=545904 I8J32_RS00570 WP_200614120.1 117520..117915(-) (pilG) [Agrilutibacter solisilvae strain R19]
MQEGGNSNLDGLKVMVIDDSKTIRRTAETLLKREGCDVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKNN
HLFKNTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRTHVHA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=545904 I8J32_RS00570 WP_200614120.1 117520..117915(-) (pilG) [Agrilutibacter solisilvae strain R19]
ATGCAAGAGGGCGGCAACAGCAACCTCGACGGCCTGAAGGTCATGGTGATCGACGATTCCAAGACCATCCGGCGCACTGC
GGAGACCCTGCTCAAGCGCGAGGGCTGCGACGTGGTGACCGCCACTGACGGCTTCGAGGCCTTGGCCAAGATCGCCGACC
AGCAACCCCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACGTGTGCGCTGATCAAGAACAAC
CACCTGTTCAAGAACACGCCTGTCATCATGCTGTCGTCCAAGGACGGATTGTTCGACAAGGCCCGGGGGCGCATCGTCGG
TTCCGAGCAGTACCTGACCAAGCCATTCACGCGCGAGGAACTCCTCGACGCAATCCGCACACATGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.033

92.366

0.702