Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | J2N83_RS06235 | Genome accession | NZ_CP071512 |
| Coordinates | 1235456..1236430 (+) | Length | 324 a.a. |
| NCBI ID | WP_070581607.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain 1b | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1230456..1241430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J2N83_RS06200 (J2N83_06200) | rpmG | 1230888..1231037 (+) | 150 | WP_011275661.1 | 50S ribosomal protein L33 | - |
| J2N83_RS06205 (J2N83_06205) | - | 1231274..1231810 (+) | 537 | WP_070581602.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| J2N83_RS06210 (J2N83_06210) | - | 1231826..1233283 (+) | 1458 | WP_207323326.1 | rhomboid family intramembrane serine protease | - |
| J2N83_RS06215 (J2N83_06215) | - | 1233267..1233470 (+) | 204 | WP_070581604.1 | YqgQ family protein | - |
| J2N83_RS06220 (J2N83_06220) | - | 1233467..1234453 (+) | 987 | WP_207323327.1 | ROK family glucokinase | - |
| J2N83_RS06225 (J2N83_06225) | - | 1234453..1234776 (+) | 324 | WP_011275666.1 | MTH1187 family thiamine-binding protein | - |
| J2N83_RS06230 (J2N83_06230) | - | 1234778..1235404 (+) | 627 | WP_070839613.1 | MBL fold metallo-hydrolase | - |
| J2N83_RS06235 (J2N83_06235) | comGA | 1235456..1236430 (+) | 975 | WP_070581607.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| J2N83_RS06240 (J2N83_06240) | comGB | 1236402..1237466 (+) | 1065 | WP_070581608.1 | competence type IV pilus assembly protein ComGB | - |
| J2N83_RS06245 (J2N83_06245) | comGC | 1237480..1237800 (+) | 321 | WP_011275670.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| J2N83_RS06250 (J2N83_06250) | comGD | 1237865..1238233 (+) | 369 | WP_240565900.1 | competence type IV pilus minor pilin ComGD | - |
| J2N83_RS06255 (J2N83_06255) | - | 1238214..1238513 (+) | 300 | WP_011275672.1 | hypothetical protein | - |
| J2N83_RS12000 | - | 1238671..1238922 (+) | 252 | WP_240556425.1 | hypothetical protein | - |
| J2N83_RS06265 (J2N83_06265) | - | 1239082..1239600 (+) | 519 | WP_070581611.1 | shikimate kinase | - |
| J2N83_RS06270 (J2N83_06270) | gcvT | 1239790..1240881 (+) | 1092 | WP_070839616.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37147.08 Da Isoelectric Point: 8.4429
>NTDB_id=545866 J2N83_RS06235 WP_070581607.1 1235456..1236430(+) (comGA) [Staphylococcus haemolyticus strain 1b]
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQYFFEHEQTMPHNFNNLEQQLNLLSKEGTICEDTA
SKYF
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQYFFEHEQTMPHNFNNLEQQLNLLSKEGTICEDTA
SKYF
Nucleotide
Download Length: 975 bp
>NTDB_id=545866 J2N83_RS06235 WP_070581607.1 1235456..1236430(+) (comGA) [Staphylococcus haemolyticus strain 1b]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGATGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCCTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACCTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGATGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCCTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACCTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
65.944 |
99.691 |
0.657 |
| comGA | Staphylococcus aureus N315 |
65.944 |
99.691 |
0.657 |