Detailed information NTG0545830

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LN359_RS01195
• Genome accession: NZ_CP087377
• Coordinates: 258575..259558 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain RIVM_C019217
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 253575..264558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LN359_RS01180 (LN359_01180)	dppA	254875..256482 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
LN359_RS01185 (LN359_01185)	dppB	256633..257652 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LN359_RS01190 (LN359_01190)	dppC	257662..258564 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LN359_RS01195 (LN359_01195)	amiE	258575..259558 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
LN359_RS01200 (LN359_01200)	dppF	259555..260559 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LN359_RS01205 (LN359_01205)	yhjV	260589..261860 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
LN359_RS01210 (LN359_01210)	-	262336..262443 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LN359_RS01215 (LN359_01215)	-	262820..262927 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
LN359_RS01220 (LN359_01220)	-	263303..263410 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=545830 LN359_RS01195 WP_001196487.1 258575..259558(+) (amiE) [Escherichia coli strain RIVM_C019217]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=545830 LN359_RS01195 WP_001196487.1 258575..259558(+) (amiE) [Escherichia coli strain RIVM_C019217]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407