Detailed information NTG0545791

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LO000_RS11295
• Genome accession: NZ_CP087354
• Coordinates: 2333973..2335079 (-)
• Length: 368 a.a.
• NCBI ID: WP_001187342.1
• Uniprot ID: A0ABX6CGL8
• Organism: Acinetobacter baumannii strain DB002
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2328973..2340079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LO000_RS11265	cydB	2330120..2331265 (+)	1146	WP_000575152.1	cytochrome d ubiquinol oxidase subunit II	-
LO000_RS11270	cydX	2331279..2331380 (+)	102	WP_000270276.1	cytochrome bd-I oxidase subunit CydX	-
LO000_RS11275	-	2331381..2331680 (+)	300	WP_085916945.1	cyd operon YbgE family protein	-
LO000_RS11280	-	2331693..2332217 (-)	525	WP_000593801.1	GNAT family N-acetyltransferase	-
LO000_RS11285	-	2332290..2332961 (-)	672	WP_000175350.1	DUF2057 domain-containing protein	-
LO000_RS11290	-	2333187..2333783 (-)	597	WP_000102943.1	nitroreductase family protein	-
LO000_RS11295	pilA	2333973..2335079 (-)	1107	WP_001187342.1	signal recognition particle-docking protein FtsY	Machinery gene
LO000_RS11300	-	2335187..2335513 (-)	327	WP_000955083.1	hypothetical protein	-
LO000_RS11305	-	2335614..2335973 (-)	360	WP_000185571.1	hypothetical protein	-
LO000_RS11310	-	2336189..2336422 (+)	234	WP_000616034.1	hypothetical protein	-
LO000_RS11315	-	2336960..2337334 (+)	375	WP_001087274.1	DUF2750 domain-containing protein	-
LO000_RS11320	-	2337475..2337906 (+)	432	WP_000156920.1	CBS domain-containing protein	-
LO000_RS11325	-	2337957..2339165 (-)	1209	WP_000129953.1	aspartate aminotransferase family protein	-
LO000_RS11330	grxD	2339393..2339734 (+)	342	WP_000138830.1	Grx4 family monothiol glutaredoxin	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 39919.72 Da
• Isoelectric Point: 4.9872

>NTDB_id=545791 LO000_RS11295 WP_001187342.1 2333973..2335079(-) (pilA) [Acinetobacter baumannii strain DB002]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK

Nucleotide

• Length: 1107 bp

>NTDB_id=545791 LO000_RS11295 WP_001187342.1 2333973..2335079(-) (pilA) [Acinetobacter baumannii strain DB002]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (83-145)

• SRP54-type protein, GTPase domain (SRP54) (165-364)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.038	86.685	0.451