Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | DDR89_RS05245 | Genome accession | NZ_CP071460 |
| Coordinates | 1013152..1013454 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CAMSA2002 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1008152..1018454
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDR89_RS05220 (DDR89_05220) | rpsR | 1008514..1008774 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| DDR89_RS05225 (DDR89_05225) | lon | 1008835..1011210 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| DDR89_RS05230 (DDR89_05230) | - | 1011227..1011874 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| DDR89_RS05235 (DDR89_05235) | fliW | 1012035..1012424 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| DDR89_RS05240 (DDR89_05240) | proC | 1012424..1013155 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| DDR89_RS05245 (DDR89_05245) | ctsT | 1013152..1013454 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| DDR89_RS05250 (DDR89_05250) | - | 1013451..1014113 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| DDR89_RS05255 (DDR89_05255) | - | 1014110..1014562 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| DDR89_RS05260 (DDR89_05260) | hemD | 1014559..1015188 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| DDR89_RS05265 (DDR89_05265) | thiE | 1015166..1015798 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| DDR89_RS05270 (DDR89_05270) | thiD | 1015788..1016600 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DDR89_RS05275 (DDR89_05275) | - | 1016597..1017283 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| DDR89_RS05280 (DDR89_05280) | - | 1017280..1018041 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=545465 DDR89_RS05245 WP_002853046.1 1013152..1013454(+) (ctsT) [Campylobacter jejuni strain CAMSA2002]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=545465 DDR89_RS05245 WP_002853046.1 1013152..1013454(+) (ctsT) [Campylobacter jejuni strain CAMSA2002]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |