Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   DDV75_RS07160 Genome accession   NZ_CP071459
Coordinates   1382544..1383728 (-) Length   394 a.a.
NCBI ID   WP_002857981.1    Uniprot ID   Q0P8K1
Organism   Campylobacter jejuni strain CAMSA2038     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1377544..1388728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDV75_RS07135 (DDV75_07135) fliL 1378692..1379228 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  DDV75_RS07140 (DDV75_07140) acpS 1379228..1379575 (+) 348 WP_002825806.1 holo-ACP synthase -
  DDV75_RS07145 (DDV75_07145) - 1379576..1379995 (-) 420 WP_002855518.1 hypothetical protein -
  DDV75_RS07150 (DDV75_07150) - 1379992..1381353 (-) 1362 WP_002855307.1 cytochrome P450 -
  DDV75_RS07155 (DDV75_07155) - 1381350..1382471 (-) 1122 WP_019108711.1 membrane protein -
  DDV75_RS07160 (DDV75_07160) kpsS 1382544..1383728 (-) 1185 WP_002857981.1 capsule polysaccharide modification protein KpsS Regulator
  DDV75_RS07165 (DDV75_07165) kpsC 1383725..1385794 (-) 2070 WP_002864209.1 capsular polysaccharide biosynthesis protein -
  DDV75_RS07170 (DDV75_07170) cysC 1385791..1386303 (-) 513 WP_002864208.1 cytidine diphosphoramidate kinase -
  DDV75_RS07175 (DDV75_07175) - 1386293..1387054 (-) 762 WP_002864207.1 CTP:phosphoglutamine cytidylyltransferase -
  DDV75_RS07180 (DDV75_07180) - 1387056..1387658 (-) 603 WP_002864206.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46938.68 Da        Isoelectric Point: 9.9831

>NTDB_id=545447 DDV75_RS07160 WP_002857981.1 1382544..1383728(-) (kpsS) [Campylobacter jejuni strain CAMSA2038]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=545447 DDV75_RS07160 WP_002857981.1 1382544..1383728(-) (kpsS) [Campylobacter jejuni strain CAMSA2038]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTTTAAACTTATAAATGATTTAAGTCGAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATAATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q0P8K1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1