Detailed information NTG0545337

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LO004_RS08835
• Genome accession: NZ_CP087331
• Coordinates: 1855336..1856442 (+)
• Length: 368 a.a.
• NCBI ID: WP_031985584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain LMG994
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1850336..1861442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LO004_RS08800	grxD	1850682..1851023 (-)	342	WP_000138830.1	Grx4 family monothiol glutaredoxin	-
LO004_RS08805	-	1851251..1852459 (+)	1209	WP_000129947.1	aspartate aminotransferase family protein	-
LO004_RS08810	-	1852511..1852942 (-)	432	WP_000156920.1	CBS domain-containing protein	-
LO004_RS08815	-	1853083..1853457 (-)	375	WP_199984673.1	DUF2750 domain-containing protein	-
LO004_RS08820	-	1853993..1854226 (-)	234	WP_000616034.1	hypothetical protein	-
LO004_RS08825	-	1854442..1854801 (+)	360	WP_000185571.1	hypothetical protein	-
LO004_RS08830	-	1854902..1855228 (+)	327	WP_000955083.1	hypothetical protein	-
LO004_RS08835	pilA	1855336..1856442 (+)	1107	WP_031985584.1	signal recognition particle-docking protein FtsY	Machinery gene
LO004_RS08840	-	1856632..1857228 (+)	597	WP_000102943.1	nitroreductase family protein	-
LO004_RS08845	-	1857454..1858125 (+)	672	WP_000175347.1	DUF2057 domain-containing protein	-
LO004_RS08850	-	1858183..1858482 (-)	300	WP_085916945.1	cyd operon YbgE family protein	-
LO004_RS08855	cydX	1858483..1858584 (-)	102	WP_000270276.1	cytochrome bd-I oxidase subunit CydX	-
LO004_RS08860	cydB	1858598..1859743 (-)	1146	WP_000575155.1	cytochrome d ubiquinol oxidase subunit II	-
LO004_RS08865	-	1859740..1861326 (-)	1587	WP_000622646.1	cytochrome ubiquinol oxidase subunit I	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 39991.79 Da
• Isoelectric Point: 4.9107

>NTDB_id=545337 LO004_RS08835 WP_031985584.1 1855336..1856442(+) (pilA) [Acinetobacter baumannii strain LMG994]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVIEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKDIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK

Nucleotide

• Length: 1107 bp

>NTDB_id=545337 LO004_RS08835 WP_031985584.1 1855336..1856442(+) (pilA) [Acinetobacter baumannii strain LMG994]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTGATCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGGCGAATGAAAGAAGGCTTGAGCAAAACTCGTCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTGGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACGACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGATATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (83-145)

• SRP54-type protein, GTPase domain (SRP54) (165-364)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.724	86.685	0.448