Detailed information NTG0545179

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LO013_RS08475
• Genome accession: NZ_CP087325
• Coordinates: 1751599..1752705 (+)
• Length: 368 a.a.
• NCBI ID: WP_002126104.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain OC073
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1746599..1757705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LO013_RS08435	-	1746674..1746997 (+)	324	WP_000121850.1	hypothetical protein	-
LO013_RS08440	grxD	1747044..1747385 (-)	342	WP_000138830.1	Grx4 family monothiol glutaredoxin	-
LO013_RS08445	-	1747613..1748821 (+)	1209	WP_000129944.1	aspartate aminotransferase family protein	-
LO013_RS08450	-	1748873..1749304 (-)	432	WP_000156920.1	CBS domain-containing protein	-
LO013_RS08455	-	1749445..1749819 (-)	375	WP_001087274.1	DUF2750 domain-containing protein	-
LO013_RS08460	-	1750256..1750489 (-)	234	WP_000616034.1	hypothetical protein	-
LO013_RS08465	-	1750705..1751064 (+)	360	WP_000185571.1	hypothetical protein	-
LO013_RS08470	-	1751165..1751491 (+)	327	WP_000955083.1	hypothetical protein	-
LO013_RS08475	pilA	1751599..1752705 (+)	1107	WP_002126104.1	signal recognition particle-docking protein FtsY	Machinery gene
LO013_RS08480	-	1752893..1753489 (+)	597	WP_024436617.1	nitroreductase family protein	-
LO013_RS08485	-	1753539..1754693 (-)	1155	WP_004738527.1	IS4 family transposase	-
LO013_RS08490	-	1754997..1755668 (+)	672	WP_000175347.1	DUF2057 domain-containing protein	-
LO013_RS08495	-	1755726..1756025 (-)	300	WP_085916945.1	cyd operon YbgE family protein	-
LO013_RS08500	cydX	1756026..1756127 (-)	102	WP_000270276.1	cytochrome bd-I oxidase subunit CydX	-
LO013_RS08505	cydB	1756141..1757286 (-)	1146	WP_000575163.1	cytochrome d ubiquinol oxidase subunit II	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 39923.71 Da
• Isoelectric Point: 4.9872

>NTDB_id=545179 LO013_RS08475 WP_002126104.1 1751599..1752705(+) (pilA) [Acinetobacter baumannii strain OC073]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAATSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK

Nucleotide

• Length: 1107 bp

>NTDB_id=545179 LO013_RS08475 WP_002126104.1 1751599..1752705(+) (pilA) [Acinetobacter baumannii strain OC073]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTGGTCGAGGCTGCAACTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTACATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAGTTGGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (83-145)

• SRP54-type protein, GTPase domain (SRP54) (165-364)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.038	86.685	0.451