Detailed information NTG0545068

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: FH974_RS13385
• Genome accession: NZ_CP071325
• Coordinates: 2964933..2968319 (+)
• Length: 1128 a.a.
• NCBI ID: WP_047886425.1
• Uniprot ID: A0A0J1H789
• Organism: Photobacterium ganghwense strain C2.2
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2959933..2973319

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FH974_RS13370 (FH974_13370)	hemL	2960696..2961991 (+)	1296	WP_047886427.1	glutamate-1-semialdehyde 2,1-aminomutase	-
FH974_RS13375 (FH974_13375)	-	2962348..2963433 (+)	1086	WP_047886426.1	AI-2E family transporter	-
FH974_RS13380 (FH974_13380)	rsmC	2963596..2964618 (+)	1023	WP_207103341.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
FH974_RS13385 (FH974_13385)	chiS	2964933..2968319 (+)	3387	WP_047886425.1	response regulator	Regulator
FH974_RS13390 (FH974_13390)	-	2968312..2968602 (-)	291	WP_146149664.1	hypothetical protein	-
FH974_RS13395 (FH974_13395)	-	2968956..2970638 (+)	1683	WP_047886423.1	ABC transporter substrate-binding protein	-
FH974_RS13400 (FH974_13400)	-	2970777..2971763 (+)	987	WP_047886422.1	ABC transporter permease	-
FH974_RS13405 (FH974_13405)	-	2971766..2972791 (+)	1026	WP_047886421.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126932.00 Da
• Isoelectric Point: 5.9997

>NTDB_id=545068 FH974_RS13385 WP_047886425.1 2964933..2968319(+) (chiS) [Photobacterium ganghwense strain C2.2]
MQKTTRFKRLQHTLMLAFLVLSITPLLLSALFFLRSHTTDLAEQSTNHLASLLDNKRKQLESFITARESEVQSFARSELA
NASGGRFYGLVGAYNQLGDISGQLQELGRSTYFTERLTMRAPAENGVTNYASHERYRLMYKRYNWAFDEYLKRSHFSDIL
LVDLQGNIVYSANSPETFSVNLQQTTHTFQALSTTFTAISTLTRQSGYSADQVPVVFTDFSAEPDHPDLAAWFAAPIIQQ
GYLHSYVFFKLSNRSIRDILSDTVATTNHQVQTLLVGQDHRSLLPQSTQAPATYSSPSIDQALAGNSGVGSFANFSGVPV
LSAFAPISLKGSEWALVVELPEKEAFARIRQLEKIFFAAMLTAVVLVIIASHWLSNSITAPLLRLTWAAERVSAGDLDQK
IGSTERSDEIGRLATSFARMQSSIRDKITLIREQNTELEQNLLVIRQKNNELQTADKLKDEFLATTSHELRTPLHGMVGI
AESLLAGANGPLQHSQRRQLEIIINSGQRLTNLVDDLLDYHKMRYGDLDIQRHAVDLASAVRLVLELSSHLLGNKPIRII
NQIPDDLPLVLGDEQRIEQVLYNLVGNAIKYTSEGKIILSATILQKQLRIQVVDTGQGIPAEQLEHIFEPLTQANTQSAH
YRQGSGLGLSISRQLVDLMGGRLYVSSQPMIGTTFSFTLNLASEHDIANSQLANRNLHFQAPISDPTVCELEDLPDNPDG
DLLLVVDDEPVNLQVLHNFLRLEGYRVITAESGQQALQLVDEQQPALVLLDIMMPEMSGYEVCEQLRKTYSMLDLPIIML
SALGQVQDRVRGFESGANDYLTKPFNKEELTARIGAHLKAGQTERQRLENQILAEEVARRKETEAGLLETQSRLLGLLES
TNEAILCVRNDGLIRYANSAAGKLFERTPEQLERHNLYDILATHLPEDIASRHHFHGKLMFRIGDGLSSLSTDVINLPEA
SGLQRMFIFDNHGPTEEHRIKVLENAVDVLSGFAFNRDRHSLDQLRHLGEEFSELADRLDDKGGSKHDTLRELLVDTMKT
TLGVWERYTRKTKFELAEESGLWRVYLDRSTLQTRTLDKYLHLETLPKTPRWRTVLSTVDFVLERCQVPADEREQLQLMR
QQLQHLIS

Nucleotide

• Length: 3387 bp

>NTDB_id=545068 FH974_RS13385 WP_047886425.1 2964933..2968319(+) (chiS) [Photobacterium ganghwense strain C2.2]
ATGCAGAAGACTACCCGTTTCAAGCGACTGCAGCATACCCTAATGCTGGCATTTCTCGTTCTCAGTATCACTCCCCTGCT
CCTCTCAGCATTATTTTTCCTTCGCTCCCACACCACTGATTTAGCAGAGCAAAGTACCAATCACCTGGCGTCATTGCTCG
ACAACAAACGCAAGCAGTTGGAGAGCTTCATTACGGCACGGGAATCGGAAGTGCAGAGCTTTGCCCGCTCTGAGCTGGCC
AATGCCAGTGGCGGACGGTTCTACGGCCTGGTCGGTGCTTATAACCAACTGGGTGACATCAGCGGGCAATTGCAGGAACT
CGGTCGCAGCACATATTTTACGGAGCGGCTGACCATGAGGGCGCCGGCTGAGAACGGAGTCACGAATTACGCCAGCCATG
AACGATACCGGCTGATGTACAAACGCTATAACTGGGCTTTCGACGAATACCTTAAGCGGTCGCATTTCAGCGACATTCTG
CTGGTCGACTTACAGGGCAATATTGTCTATTCCGCCAACAGTCCCGAGACATTCAGCGTCAACCTGCAGCAAACCACCCA
CACGTTTCAGGCACTGAGCACTACTTTTACCGCGATTTCGACCCTCACCCGGCAATCCGGCTACAGCGCGGATCAGGTTC
CGGTCGTATTCACGGATTTCAGTGCTGAGCCAGATCACCCGGATCTCGCCGCCTGGTTTGCCGCCCCCATCATTCAGCAA
GGCTATCTGCACAGTTATGTCTTTTTTAAGCTAAGTAACCGCTCCATCCGGGACATTCTCAGCGACACCGTGGCCACAAC
CAATCATCAGGTGCAGACCCTGTTGGTAGGCCAGGATCACCGCTCATTGCTGCCGCAAAGTACTCAGGCCCCCGCGACCT
ATTCCAGCCCGAGCATCGATCAGGCACTGGCCGGCAACAGCGGCGTGGGCAGCTTTGCCAACTTCAGCGGGGTGCCGGTA
CTGAGCGCCTTCGCCCCCATCAGCCTCAAGGGCAGTGAGTGGGCGCTGGTCGTCGAGCTGCCAGAAAAAGAAGCCTTCGC
CCGCATTCGCCAGCTGGAAAAAATCTTCTTTGCGGCCATGCTGACGGCCGTGGTGCTGGTGATTATCGCTTCGCACTGGC
TCTCCAACTCCATCACCGCGCCTTTGCTGCGCCTGACCTGGGCCGCTGAGCGGGTATCCGCCGGGGATCTGGATCAGAAG
ATAGGAAGCACCGAGCGCAGCGACGAAATCGGCCGCTTGGCCACCAGCTTTGCCCGCATGCAATCTTCCATTCGGGATAA
AATCACCCTGATCCGCGAACAAAACACGGAGCTGGAGCAAAACCTGCTGGTGATACGGCAGAAGAACAACGAGCTGCAGA
CCGCTGATAAACTGAAAGATGAGTTTCTGGCCACCACATCCCATGAACTGCGGACCCCGCTGCACGGGATGGTCGGCATC
GCCGAATCGCTGCTGGCCGGTGCCAACGGCCCGTTACAACATTCGCAACGACGCCAGCTGGAGATCATCATCAATAGCGG
CCAGCGCCTGACCAACCTGGTCGATGATCTGCTGGATTATCATAAGATGCGTTATGGCGATCTTGATATACAGCGCCATG
CGGTAGATCTGGCCTCGGCCGTGCGTCTGGTACTGGAACTGTCCAGCCACCTGCTGGGCAACAAGCCGATCCGCATCATC
AACCAGATCCCTGATGACCTGCCGCTGGTGCTGGGCGATGAGCAGCGTATCGAGCAGGTACTGTACAACCTGGTCGGTAA
CGCCATCAAATACACCTCTGAAGGTAAGATCATCCTTTCAGCCACGATTTTGCAAAAGCAGCTTCGGATTCAGGTCGTAG
ATACCGGCCAGGGGATCCCTGCCGAGCAGCTGGAGCATATCTTTGAGCCGCTGACCCAGGCCAATACGCAATCCGCCCAT
TACCGCCAGGGCTCCGGACTGGGGCTGTCCATTAGCCGCCAGCTGGTGGATTTAATGGGGGGACGCCTGTACGTCAGCAG
CCAACCGATGATAGGCACTACGTTCAGCTTCACCCTGAACCTGGCCAGCGAGCATGACATTGCTAACAGTCAGTTGGCCA
ACCGCAACCTTCACTTTCAGGCTCCGATCAGCGACCCAACGGTGTGTGAGCTGGAAGATTTACCGGATAATCCGGATGGC
GACCTGTTGCTGGTCGTGGATGATGAACCGGTCAACCTGCAAGTTCTGCATAACTTCCTGCGACTGGAAGGGTATCGGGT
GATCACTGCAGAAAGTGGCCAGCAGGCGCTTCAGCTGGTTGATGAACAACAGCCCGCACTGGTGTTGCTGGATATTATGA
TGCCGGAGATGTCCGGCTATGAAGTCTGTGAGCAACTGCGGAAAACCTACAGCATGCTGGATTTACCCATCATCATGCTT
TCTGCCCTGGGACAGGTTCAGGATCGGGTACGCGGCTTTGAATCCGGTGCCAACGATTACCTGACCAAGCCATTCAATAA
AGAAGAGCTGACCGCCCGGATCGGGGCACACCTGAAAGCTGGACAAACTGAACGCCAGCGCCTGGAAAATCAGATCTTGG
CCGAAGAAGTGGCACGGCGAAAAGAAACGGAAGCGGGCCTGCTGGAAACCCAGAGCCGCCTGCTTGGGCTGCTCGAATCC
ACCAATGAAGCGATACTCTGTGTCCGTAACGACGGCCTTATACGCTATGCCAACAGCGCCGCCGGTAAACTGTTTGAACG
CACTCCTGAGCAACTGGAGCGCCACAACCTTTACGATATTCTGGCCACTCATCTGCCGGAAGACATCGCCAGCCGCCACC
ATTTCCACGGCAAGCTGATGTTCCGCATCGGGGATGGCCTCAGTTCCCTGAGCACTGACGTGATTAACCTGCCGGAAGCC
TCCGGGTTACAGCGGATGTTTATTTTTGACAACCACGGTCCGACTGAAGAGCACCGTATCAAAGTGCTGGAAAATGCCGT
CGACGTTTTATCCGGCTTTGCCTTCAACCGTGACCGGCACAGCCTGGACCAACTCCGTCATCTGGGCGAGGAATTCAGCG
AACTGGCGGATCGCCTGGATGACAAAGGCGGCAGCAAGCACGATACCCTGCGCGAACTGCTGGTCGATACCATGAAGACC
ACCCTTGGCGTCTGGGAACGCTATACCAGGAAAACCAAATTTGAACTGGCCGAAGAAAGCGGGCTCTGGCGGGTCTACCT
CGACCGCAGTACCCTGCAAACCCGGACACTGGATAAATACCTGCACCTTGAAACTCTGCCCAAAACACCGCGCTGGCGCA
CGGTACTCAGCACCGTGGATTTTGTGCTGGAACGCTGTCAGGTGCCCGCCGATGAAAGAGAACAACTGCAACTGATGAGG
CAGCAACTGCAACACCTTATCAGCTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (724-834)

• HAMP domain (HAMP) (373-426)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (572-681)

3D structure

• AlphaFold DB: A0A0J1H789

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	57.345	100	0.574