Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   J0G22_RS24520 Genome accession   NZ_CP071324
Coordinates   4890057..4890653 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain JS161205112     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4885057..4895653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J0G22_RS24500 (J0G22_24500) - 4885249..4887006 (-) 1758 WP_004224030.1 Lon protease family protein -
  J0G22_RS24505 (J0G22_24505) matP 4887192..4887644 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  J0G22_RS24510 (J0G22_24510) ompA 4887776..4888846 (-) 1071 WP_002898408.1 porin OmpA -
  J0G22_RS24515 (J0G22_24515) sulA 4889199..4889708 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  J0G22_RS24520 (J0G22_24520) sxy/tfoX 4890057..4890653 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  J0G22_RS24525 (J0G22_24525) yccS 4890667..4892802 (-) 2136 WP_002898422.1 YccS family putative transporter -
  J0G22_RS24530 (J0G22_24530) - 4892820..4893266 (-) 447 WP_004224032.1 YccF domain-containing protein -
  J0G22_RS24535 (J0G22_24535) helD 4893391..4895445 (+) 2055 WP_004224033.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=545040 J0G22_RS24520 WP_004179217.1 4890057..4890653(+) (sxy/tfoX) [Klebsiella pneumoniae strain JS161205112]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=545040 J0G22_RS24520 WP_004179217.1 4890057..4890653(+) (sxy/tfoX) [Klebsiella pneumoniae strain JS161205112]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51