Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   JZY07_RS11460 Genome accession   NZ_CP071305
Coordinates   2327409..2328173 (+) Length   254 a.a.
NCBI ID   WP_024400054.1    Uniprot ID   -
Organism   Streptococcus suis strain SC183     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2322409..2333173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZY07_RS11445 (JZY07_11445) - 2324791..2325474 (-) 684 WP_012775416.1 YoaK family protein -
  JZY07_RS11450 (JZY07_11450) rlmH 2325499..2325978 (-) 480 WP_024400055.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JZY07_RS11455 (JZY07_11455) htrA 2326152..2327348 (+) 1197 WP_009911075.1 trypsin-like peptidase domain-containing protein Regulator
  JZY07_RS11460 (JZY07_11460) spo0J 2327409..2328173 (+) 765 WP_024400054.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 29042.35 Da        Isoelectric Point: 9.4317

>NTDB_id=544883 JZY07_RS11460 WP_024400054.1 2327409..2328173(+) (spo0J) [Streptococcus suis strain SC183]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSYQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKILKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=544883 JZY07_RS11460 WP_024400054.1 2327409..2328173(+) (spo0J) [Streptococcus suis strain SC183]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCTATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAAGAA
CTGACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATATCAGACTAAACAAGCTGTAGAAGAAGGAAAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACCAAGCTTAAACAACGTGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTCTCAAGAAGAAAAACGGGAGCGGAGAAATTCGAATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-94)

HTH domain found in ParB protein (HTH_ParB)

(146-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547