Detailed information NTG0544532

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JWY36_RS19945
• Genome accession: NZ_CP071276
• Coordinates: 3719746..3720891 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain JNFE0126
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3714746..3725891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWY36_RS19925 (JWY36_19775)	albF	3714762..3716042 (+)	1281	WP_014481221.1	M16 family metallopeptidase	-
JWY36_RS19930 (JWY36_19780)	albG	3716039..3716740 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
JWY36_RS19935 (JWY36_19785)	ywhL	3716746..3718122 (-)	1377	WP_014481223.1	YncE family protein	-
JWY36_RS19940 (JWY36_19790)	ywhK	3718161..3719516 (-)	1356	WP_014481224.1	YncE family protein	-
JWY36_RS22485	-	3719513..3719743 (-)	231	Protein_3883	hypothetical protein	-
JWY36_RS19945 (JWY36_19795)	rapF	3719746..3720891 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
JWY36_RS19950 (JWY36_19800)	phrF	3720875..3720994 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
JWY36_RS19955 (JWY36_19805)	-	3721092..3721519 (+)	428	Protein_3886	YbaK/EbsC family protein	-
JWY36_RS19960 (JWY36_19810)	speB	3721584..3722456 (-)	873	WP_003227545.1	agmatinase	-
JWY36_RS19965 (JWY36_19815)	speE	3722517..3723347 (-)	831	WP_003227543.1	spermidine synthase	-
JWY36_RS19970 (JWY36_19820)	pbpG	3723549..3725624 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=544532 JWY36_RS19945 WP_014481226.1 3719746..3720891(+) (rapF) [Bacillus subtilis strain JNFE0126]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=544532 JWY36_RS19945 WP_014481226.1 3719746..3720891(+) (rapF) [Bacillus subtilis strain JNFE0126]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572