Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   J0J70_RS05775 Genome accession   NZ_CP071250
Coordinates   1187964..1188920 (+) Length   318 a.a.
NCBI ID   WP_055277010.1    Uniprot ID   A0A9Q9FH05
Organism   Turicibacter bilis strain ISU324     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1182964..1193920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J0J70_RS05750 (J0J70_05765) hslO 1184486..1185355 (+) 870 WP_055277014.1 Hsp33 family molecular chaperone HslO -
  J0J70_RS05755 (J0J70_05770) - 1185372..1185674 (+) 303 WP_055242414.1 hypothetical protein -
  J0J70_RS05760 (J0J70_05775) - 1185719..1185895 (-) 177 WP_212724886.1 hypothetical protein -
  J0J70_RS05765 (J0J70_05780) - 1186062..1187345 (+) 1284 WP_212724885.1 alkaline phosphatase family protein -
  J0J70_RS05770 (J0J70_05785) - 1187375..1187746 (-) 372 WP_055242418.1 AraC family transcriptional regulator -
  J0J70_RS05775 (J0J70_05790) ceuB 1187964..1188920 (+) 957 WP_055277010.1 ABC transporter permease Machinery gene
  J0J70_RS05780 (J0J70_05795) - 1188907..1189857 (+) 951 WP_212724884.1 iron chelate uptake ABC transporter family permease subunit -
  J0J70_RS05785 (J0J70_05800) - 1189854..1190609 (+) 756 WP_055277006.1 ABC transporter ATP-binding protein -
  J0J70_RS05790 (J0J70_05805) - 1190647..1191621 (+) 975 WP_055242426.1 siderophore ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34784.83 Da        Isoelectric Point: 9.2695

>NTDB_id=544309 J0J70_RS05775 WP_055277010.1 1187964..1188920(+) (ceuB) [Turicibacter bilis strain ISU324]
MKKRYLATLLIILSVISVFIGVSEVTLSAILNGDSHQLYILFVSRIPRLLSVCVTGIGMSICGLIMQQLTRNKFVSPTTA
ATMDFAKLGMLIAMVFFAGASLVHKMLFAFICSLFGTFLFMGIMKQVKFQNSLFIPLIGMMLGNVVNSITSFIAYQFDLV
QNISSWAQGDFTNIMKGNYELLYLSIPLVVVAFLYANKFTIAGMGEDFSTNLGLNHKWIVNVGLTIVALITSVIIITIGS
IPFIGLIVPNIVSMYLGDNLKHSLGHTALLGAVFLLICDVIGRLVIYPYEVSIGLTVGIIGSVIFLYMLMRRDSNASA

Nucleotide


Download         Length: 957 bp        

>NTDB_id=544309 J0J70_RS05775 WP_055277010.1 1187964..1188920(+) (ceuB) [Turicibacter bilis strain ISU324]
TTGAAGAAGAGATATTTAGCAACTTTGCTTATCATCTTATCCGTCATTTCCGTGTTTATTGGAGTCAGTGAAGTGACACT
ATCAGCAATTTTAAATGGCGATAGTCATCAATTATATATTTTATTTGTCAGTCGTATACCACGTTTATTAAGTGTTTGTG
TAACTGGGATTGGAATGAGTATCTGCGGTTTAATTATGCAGCAGCTGACAAGAAATAAATTTGTTTCACCAACGACAGCA
GCAACGATGGATTTTGCAAAGTTAGGAATGTTAATTGCAATGGTATTCTTTGCAGGGGCTTCACTCGTCCATAAGATGCT
GTTTGCTTTTATTTGTTCATTATTTGGAACATTTTTATTTATGGGGATTATGAAGCAAGTAAAATTTCAAAATTCCTTAT
TTATTCCGTTAATCGGGATGATGCTTGGAAATGTCGTCAATTCGATCACAAGCTTTATTGCTTATCAGTTTGATCTTGTA
CAAAATATTTCTTCTTGGGCACAGGGAGATTTCACGAACATCATGAAAGGAAATTATGAGTTACTTTATTTAAGTATTCC
TCTTGTTGTTGTCGCTTTCTTATATGCCAATAAATTTACGATTGCTGGGATGGGAGAAGATTTTTCAACTAATCTAGGGC
TTAATCATAAATGGATTGTCAATGTAGGATTAACGATTGTCGCTTTAATTACATCGGTCATCATTATTACCATTGGATCG
ATTCCGTTTATCGGATTAATTGTTCCAAATATTGTATCGATGTACTTAGGCGATAACTTAAAACATAGTTTAGGACATAC
TGCATTACTAGGAGCAGTATTCTTACTGATTTGTGATGTGATTGGACGCTTAGTCATTTATCCGTATGAAGTATCGATTG
GATTAACTGTTGGAATTATCGGAAGTGTCATTTTCTTATACATGTTGATGAGGAGGGATTCAAATGCGTCGGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.479

98.428

0.497