Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SCAZ3_RS10415 Genome accession   NZ_AIDX01000001
Coordinates   2156845..2157510 (+) Length   221 a.a.
NCBI ID   WP_003048486.1    Uniprot ID   -
Organism   Streptococcus canis FSL Z3-227     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2151845..2162510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCAZ3_RS10395 (SCAZ3_06145) - 2152385..2152671 (-) 287 Protein_2044 [citrate (pro-3S)-lyase] ligase -
  SCAZ3_RS12060 (SCAZ3_06150) - 2152755..2152925 (-) 171 WP_003048477.1 hypothetical protein -
  SCAZ3_RS10400 (SCAZ3_06155) - 2153092..2154054 (+) 963 WP_003048479.1 S41 family peptidase -
  SCAZ3_RS10405 (SCAZ3_06160) - 2154092..2154844 (+) 753 WP_003048482.1 ABC transporter ATP-binding protein -
  SCAZ3_RS10410 (SCAZ3_06165) - 2154846..2156801 (+) 1956 WP_003048484.1 ABC transporter permease -
  SCAZ3_RS10415 (SCAZ3_06170) braR 2156845..2157510 (+) 666 WP_003048486.1 DNA-binding response regulator Regulator
  SCAZ3_RS10420 (SCAZ3_06175) - 2157507..2158454 (+) 948 WP_003048487.1 sensor histidine kinase -
  SCAZ3_RS10425 (SCAZ3_06180) - 2158522..2159064 (-) 543 WP_003048489.1 Gx transporter family protein -
  SCAZ3_RS10430 (SCAZ3_06185) - 2159223..2161115 (+) 1893 WP_003048491.1 NAD(P)/FAD-dependent oxidoreductase -
  SCAZ3_RS10435 (SCAZ3_06190) - 2161194..2162192 (+) 999 WP_003048493.1 polyprenyl synthetase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25481.14 Da        Isoelectric Point: 5.3038

>NTDB_id=54379 SCAZ3_RS10415 WP_003048486.1 2156845..2157510(+) (braR) [Streptococcus canis FSL Z3-227]
MTKHDKIYIIEDDTTILSLLDNHLSQAYHVRTVTNFRDIKQEVLTYQPDLILMDITLPFFNGFYWTTEIRKQSTVPIIFI
SSSNDEMDTVMALNMGGDDFVSKPFSLTILDAKIAAFLRRSQQFTSDDISLDQFKLHFDGTLSNGEDTVTLSPTEHKMLT
ILMTRNQEIVSKEEILEKLWENDNFIDHNTLNVNMTRLRKKIGSIGFDRIHTVRGVGCLIK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=54379 SCAZ3_RS10415 WP_003048486.1 2156845..2157510(+) (braR) [Streptococcus canis FSL Z3-227]
ATGACAAAACACGACAAAATTTATATTATCGAAGATGATACAACAATCTTATCTCTTCTTGACAATCACCTTAGCCAAGC
CTACCACGTTAGGACTGTTACTAATTTTAGGGATATTAAACAAGAAGTGCTGACTTACCAACCAGATCTTATTTTAATGG
ATATTACTCTTCCATTTTTCAATGGTTTTTATTGGACGACTGAAATCCGAAAGCAGTCTACCGTTCCTATTATTTTTATT
TCCAGCAGCAATGATGAAATGGACACGGTTATGGCCCTCAATATGGGAGGAGATGATTTTGTATCTAAACCTTTTTCATT
AACCATTTTAGATGCCAAAATAGCAGCTTTTTTACGGCGTTCCCAACAGTTTACCAGTGATGATATTAGCCTTGATCAGT
TCAAGCTTCATTTTGATGGTACCTTATCCAATGGGGAAGATACGGTCACTCTTTCACCGACAGAGCACAAAATGCTGACC
ATTTTGATGACCAGAAATCAAGAAATTGTTTCCAAAGAGGAAATCTTGGAAAAACTATGGGAAAACGATAACTTTATTGA
TCATAACACGCTCAATGTTAACATGACACGATTACGTAAAAAAATTGGGAGCATTGGTTTCGATCGTATTCATACTGTTA
GGGGAGTGGGGTGCCTCATCAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-217)

Response regulator receiver domain (Response_reg)

(7-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.544

98.19

0.457