Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SDSE_RS21270 Genome accession   NC_019042
Coordinates   2178660..2179436 (+) Length   258 a.a.
NCBI ID   WP_003054458.1    Uniprot ID   A0A9X5R320
Organism   Streptococcus dysgalactiae subsp. equisimilis AC-2713     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2173660..2184436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDSE_RS21250 (S_dysgal_equisimilis_AC2713_2239) - 2175431..2176414 (+) 984 WP_015058181.1 IS30 family transposase -
  SDSE_RS21260 (S_dysgal_equisimilis_AC2713_2240) rlmH 2176657..2177136 (-) 480 WP_003057960.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SDSE_RS21265 (S_dysgal_equisimilis_AC2713_2241) htrA 2177348..2178571 (+) 1224 WP_003054444.1 trypsin-like peptidase domain-containing protein Regulator
  SDSE_RS21270 (S_dysgal_equisimilis_AC2713_2242) spo0J 2178660..2179436 (+) 777 WP_003054458.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29136.15 Da        Isoelectric Point: 10.3001

>NTDB_id=54330 SDSE_RS21270 WP_003054458.1 2178660..2179436(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTQKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQL
LLPFANQEELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=54330 SDSE_RS21270 WP_003054458.1 2178660..2179436(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTCTCACACTAACCGACGAAAAGGAACAGTTAGTTTATGCTAATAGAATCAAAAATGAAGGGTT
AAGTGTACGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACCCCTACCCAGAAAAATAAAAATATTTTTATCA
CTTCTTTAGAAGATCAGCTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTG
CTGTTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.198

99.612

0.57

Multiple sequence alignment